Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4423 |
Symbol | fbiC |
ID | 3912238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5010288 |
End bp | 5012750 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886328 |
Product | FO synthase |
Protein accession | YP_488020 |
Protein GI | 86751524 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.308289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGT CCCGATCGGA CGACGATGTT CGAACCCAAG ACGAACGCCG TGGTCGGCGG CACAATGAGA TGAAGGTCGA CGACATGGTG TGGGACACGC GGGACGCCGA AGCTCTGTTG CGGGCGTACC AGGCGATGCC GATGGCGGAA CTGCTCGACG AGGCCGCGAC GCTCGCCCGC GACGGTCACC GCCATGTGAT CAGCTACTCG CGCAAGGTGT TCGTGCCGCT GACCCGTCTG TGCCGCGACA GCTGCGGCTA CTGCACCTTC GCCAAAACGC CGCGCCAGGT CGAGGCGGCC TTCCTGTCGC CGGACGATGT GCTGGCGATC GTCCGGGCCG GGCAGGCGGC TGGCTGTCAC GAGGCGCTGC TGACGCTCGG CGACAAGCCC GAGGCACGCT ACGCCGCCGC GCGAGAATTT CTTGCGGCGC AGGGCGTCGC GACGACGGTC GACTACGTCG AGAAGATCTG CAAGCTGATC CTGGCCGAGA CCGGCCTGCT GCCGCACGTC AATGCCGGCG TGATGAGTGA AGCGGAGACC GCGCGGCTGC GCAAGGTGAG CGTGTCGCAG GGCATCATGC TGGAGAGCGT GTCCGAGCGG CTGTGCGCGC GCGGCGAGGC GCATTTCGGC TCGCCCGACA AATTGCCGGC GGTGCGGCTG GACGCGATCG CGGCCGCGGG CAGGCTGCGG GTGCCGTTCA CCAGCGGAAT TCTGATCGGC ATCGGTGAGA CCCGCCTCGA GCGGGTGCAA TCGCTGCTGG CGCTGCGCTC GCTGCATCGG CGCTACGGGC ATCTGCAGGA AATCATCGTG CAGAATTTCC GCGCCAAGGC CGATACGCGG TTCGCGGACC GGCACGAGCC CGGACTTGAA GACCTGCTGT GGACCGCCGC GGTGGCGCGC CTGATCTTCG GGCCGAAGAT GAACATCCAG GTGCCACCGA ACCTCAGCTA CGCGGATTAT CCGCGGCTGC TGGAAGCCGG CATCAACGAC TGGGGTGGGA TTTCGCCGGT CACCGCCGAT CACGTCAATC CGGAAGCGCC GTGGCCGGAG ATCGCGCGGC TGCAGCAGGC GACCGAAGCG GTCGGGCTGA CGCTGCAGCC CCGGCTCGCG GTGTATCCCG CCTATGTTCG CCACGCCGCG GACTGGATCG ATCCGGCGCT GCTGCCGAAG GTCCTGAAAG CGGTCGACGC CGACGGCTTC CCGCGCGACG ATGGTTGGAT GCCGGGCGGT CTGGCGCCGA TCCCGCCGAC CGGCGCCGCG CGCCGCAGCG ACCCTTCGCT GGAGGCACTC GTCGTCCGCG CGGCGGGCGG GACGCGGCTG TCGCAGCCCG AGGTGCAGGC GCTGTTCGGC GCGCGCGGCG GCGACGTCGA CATGATCTGC GAGGCGGCCG ACGCGGTGCG AGCGGCGTCG AGCGGCGAGA CCGTGCGCTA CGTCGTCAAC CGCAACATCA ACTACACCAA TGTCTGCAGC TACGCCTGCA AGTTCTGCGC GTTCTCCAAG GGCAAGACCC ACGACCATCT GCGCGGGAGG CCCTACGACC TGTCGCTCGA GGAGGTTGCG CGTCGCGCCC GCGAAGCGTG GGATCGCGGC GCGACCGAAG TCTGCATGCA GGGTGGCATC AACCCGCACT ACACCGGCAA GACCTATGTG GATCTGTTGC GCGCGGTGAA GAACGAAGTG CCGCAGATGC ACGTCCACGC GTTCTCGCCT TTGGAAGTGA GCCAAGGTGC GGCCACCCTG GGCATGTCGG TGTCGAACTT CCTGTCGATG CTGCGCGACG AAGGCCTCGG CTCGCTGCCC GGCACCGCTG CCGAAATCCT CGACGACAAG GTGCGGCAGG TCATCTGCGC CGACAAGCTC GACACGCAGA TCTGGCTGGA CATCGTGCGC AGTGCGCATC GGGTCGGTCT GCGCACCACG GCGACGATCA TGTTCGGCCA CGTCGAAGGA TCCGACAGCT GGGCCGCGCA TCTGTTGCGA ATTCGCGATC TGCAGGAGCA GACCGGCGGC TTCACCGAAT TCGTGCCGCT GCCGTTCATC CATATGGAAG CGCCGATGTC GCTGCGCGGC CAGGCGCGCA GCGGCCCGAC CTGGCGCGAG GTGCGGCTGA TGCATGCGGT GGCGCGGCTG GTCTTGTATC CGCTGATCAC CAATATTCAG GCCTCCTGGG TGAAGCTCGG CGAGGACGGC GTCGCGAGTC TTCTGCGGTC CGGCGTCAAC GATCTCGGCG GCACGCTGAT GAACGAGAGT ATCTCGCGCG CCGCCGGTAC CCAGCATGGG CAGGAATTGG CGCCCGAAGC GATGGAAGCC CTGATCACGC GAGCCGGCCG GGTCGCCGAG CAGCGGACGA CGCTGTATCG CCCGGTCGAT GCCGAGCGCC GCGACGCCAG CTTCGCCGCG CCGGAGCTGC AGGATCTGGT GATGACACCG TTCGTGCCGA AGCAGATGGC GCTGGCACGA TGA
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Protein sequence | MIASRSDDDV RTQDERRGRR HNEMKVDDMV WDTRDAEALL RAYQAMPMAE LLDEAATLAR DGHRHVISYS RKVFVPLTRL CRDSCGYCTF AKTPRQVEAA FLSPDDVLAI VRAGQAAGCH EALLTLGDKP EARYAAAREF LAAQGVATTV DYVEKICKLI LAETGLLPHV NAGVMSEAET ARLRKVSVSQ GIMLESVSER LCARGEAHFG SPDKLPAVRL DAIAAAGRLR VPFTSGILIG IGETRLERVQ SLLALRSLHR RYGHLQEIIV QNFRAKADTR FADRHEPGLE DLLWTAAVAR LIFGPKMNIQ VPPNLSYADY PRLLEAGIND WGGISPVTAD HVNPEAPWPE IARLQQATEA VGLTLQPRLA VYPAYVRHAA DWIDPALLPK VLKAVDADGF PRDDGWMPGG LAPIPPTGAA RRSDPSLEAL VVRAAGGTRL SQPEVQALFG ARGGDVDMIC EAADAVRAAS SGETVRYVVN RNINYTNVCS YACKFCAFSK GKTHDHLRGR PYDLSLEEVA RRAREAWDRG ATEVCMQGGI NPHYTGKTYV DLLRAVKNEV PQMHVHAFSP LEVSQGAATL GMSVSNFLSM LRDEGLGSLP GTAAEILDDK VRQVICADKL DTQIWLDIVR SAHRVGLRTT ATIMFGHVEG SDSWAAHLLR IRDLQEQTGG FTEFVPLPFI HMEAPMSLRG QARSGPTWRE VRLMHAVARL VLYPLITNIQ ASWVKLGEDG VASLLRSGVN DLGGTLMNES ISRAAGTQHG QELAPEAMEA LITRAGRVAE QRTTLYRPVD AERRDASFAA PELQDLVMTP FVPKQMALAR
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