| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4414 |
|---|
| Symbol | |
|---|
| ID | 3912229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 5000466 |
|---|
| End bp | 5001332 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637886319 |
|---|
| Product | molybdopterin dehydrogenase, FAD-binding |
|---|
| Protein accession | YP_488011 |
|---|
| Protein GI | 86751515 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.939465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCTCG CCCCGTTCCA GTTGCATCGT CCGACCGAGC TTGAGGCCGC GCTGGCATTG
CGCGAACAGT TCGGCGACGA CAGCGCGTAT TATGCGGGCG GAACGGAGCT GCTGCTGGCG
CTGAAGGCGC GCGTCCTGCG CTACGAGCAT CTGATCGATC TGAAGCGCAT CGCCGGATTC
GACCGGCTCG CGCGCGACGG CAACGAGCTG GTGATCGGGC CGCTGGTGAC GCATCTGCGG
CTCGCCACCG ACCCGCTGAT CCGCGAATTC CTGCCGGCCT ACGCCAAGCT CAGCGACAAC
GTCGGCAACA TCCGCGTGCG GGCGTCGGGC ACGCTCGCCG GCAATCTGTG TTTCTCGGAG
CCGCACGCCG ATCCCCCGGC GCTGCTCTGC CTGCTCGGCG CATCGGTGAC GTTGCACGGG
CCGGACGGCC GGCGTAGCGT GCCGATGGCC GAGTTCATCC TCGGTCCGTT CACCACCGCG
CGCGCCGACG ACGAGATTCT CACCGCGATC CGCGTCCCGC TGCCGACCGC CGGCGAGCAA
TTCTGCTATC GCAGCTTCGG TCACCTCGAA TACCCTGCCG TCGGCGTGGC GGCGGCGTAT
CAGTCGCAGG CCGGCGCGCC GCGCTACCGC GTCTGGATCG GCTGCATCGG CGACAACCCG
ATTCATGCGG AGCCGGTCGA AGCGGCACTC GCGGGCGTGC CGCCGCAGGC GCTGTCCGAC
GTCTTGCCGC AGGCGGCCGA AGCCATGGCG GCCGAACTGC CGGCGTCCGA CGACATCTAC
GGCAGCGCCG ACTACAAGCG GCATCTCGCC GCCGTGTTCA TCGGACGCGC AGTGCTGGAC
AGCGCCGGCG TGGCAGGAGG GCGCTGA
|
|---|
| Protein sequence | MRLAPFQLHR PTELEAALAL REQFGDDSAY YAGGTELLLA LKARVLRYEH LIDLKRIAGF
DRLARDGNEL VIGPLVTHLR LATDPLIREF LPAYAKLSDN VGNIRVRASG TLAGNLCFSE
PHADPPALLC LLGASVTLHG PDGRRSVPMA EFILGPFTTA RADDEILTAI RVPLPTAGEQ
FCYRSFGHLE YPAVGVAAAY QSQAGAPRYR VWIGCIGDNP IHAEPVEAAL AGVPPQALSD
VLPQAAEAMA AELPASDDIY GSADYKRHLA AVFIGRAVLD SAGVAGGR
|
|---|
| |