| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4410 |
|---|
| Symbol | |
|---|
| ID | 3912225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4997409 |
|---|
| End bp | 4998038 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637886315 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_488007 |
|---|
| Protein GI | 86751511 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC CGGCGGCAGG CGCGACGGAG GAGCGGTTCG ATCAGATCGA TCTCGCCGCG
CTCGGCCGCG CCGACCGCTA CAAGATGCTG ACCGGCGCGG TGATCCCGCG GCCGATCGCG
TTCGTCACGT CGCTCGGCCC GGGCGGCATC GTCAATGCCG CGCCGTTCAG CCAGTTCGTG
ATCCTCGCCG TCGATCCGGG CCTGCTCGGC TTTTCGGTCG GGCCGCGCAC CGGCAGCGAC
GTCGCCAAGG ACACGCTGGC CAATGTGCAG CGCGCCGGCG AGTTCGTCAT CAACATGGTG
CCGGAAGGCT GGGAACAGAG CGTCCAGCAG GCGAGCGAAG AGTATCCACC CGACGTCAGC
GAGGTCGATC TGCTCGGCTT CGCGACGCTG CCGTCGCGCC ATATCCGGAC GCCGCGGCTC
GCCGGCAGCA AGATCCAGTT CGAGTGCCGG CTCGACCAGG TGCTGACCTT CGGCGATGCC
CCCAACCATC TGGTGGTCGG GCGGATCGTC GCGATGCACG TGGCCGCGGG ATTGACGCAG
AACCACAAGA TCGATCCCCG GGCCTATGCC CCGGTCGCCC GCATCGGCGG CCGCAACTAC
GTGCGGCTCG GCGACATCGT CGAAGTATAA
|
|---|
| Protein sequence | MSEPAAGATE ERFDQIDLAA LGRADRYKML TGAVIPRPIA FVTSLGPGGI VNAAPFSQFV
ILAVDPGLLG FSVGPRTGSD VAKDTLANVQ RAGEFVINMV PEGWEQSVQQ ASEEYPPDVS
EVDLLGFATL PSRHIRTPRL AGSKIQFECR LDQVLTFGDA PNHLVVGRIV AMHVAAGLTQ
NHKIDPRAYA PVARIGGRNY VRLGDIVEV
|
|---|
| |