| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4405 |
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| Symbol | |
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| ID | 3912220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4991850 |
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| End bp | 4993556 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637886310 |
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| Product | ABC transporter related |
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| Protein accession | YP_488002 |
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| Protein GI | 86751506 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.292842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCA AGTTCTTCGC CTACTATCGG CCGTGGAAGA CGCTGTTCAT CCTGGATTTC
TCCTGCGCTG TGGTGTCGGC CCTGCTCGAA CTCGGCTTTC CGATGGCGAT CAGGGCGTTC
GTCGACGATC TCCTGCCGAC CCAGCAATGG GGGCTCATCC TTCTCGCCTC TGCGGGCCTG
CTCGTGATCT ATCTCACCAA CACCGCGCTG ATCGCGGTGG TGGTGTATTG GGGCCATAAG
CTCGGCATCA ACATCGAGAC CGAGATGCGG CGCAAGGCCT TCGACCATTT GCAGAAGCAG
TCGTTCCGCT TCTTCGACGA CAACAACAGC GGCCATCTGG TGGCGCGGGT CACCAAGGAT
CTCGAGGAGA TCGGCGAGGT GGCGCACCAC GGCCCGGAAG ACCTGTTCAT CGCGGCGATG
ACGTTCGTCG GTGCGTTCGC GTTGATGTTC GCCGTCAATC CGAAGCTGGC GCTGATCACC
GCCGCCATCG TGCCGCTGAT CGCCTGGATC ACCTCGCGCT ACGGCGCGCA GATGACCGCC
AATTGGCAGC AGATCTACAG TCGGGTCGGC GATTTCAACG TCCGCATCGT CGAAAATGTC
GGCGGCATCC GCATCGTCCA GGCCTTCGCC AACGAAGATC ACGAACGCCG GCTGTTCGCG
CGCGACAACG CGAATTATCG CCGCACCAAG CTCGAGGCCT ATCGCATCAT CGCCGCAAGC
AGCTCGTTGA GCTACATGGG CACCCGTCTG ATCCAGCTGG TGGTGATGGT GGCCGGCAGC
TATTTCGTGT TGCGGGGCGA ATTGTCGAAC GGCGGCTTCG TCGGCTTTCT GCTGCTGGTC
AACGTGTTCT TCCGGCCGAT CGACAAGATG CTGTCGGTGA TCGAGACCTA CCCCAAGGGG
ATCGCCGGCT TCCGCCGCTA TCTCGCATTG CTGGAGTCCG AGCCGGAGAT CGTCGACCGT
CCGGGCGCCG TCAGCGTCAC CGCGTTGCGC GGCGACGTGC GCTACAGCGG CGTCAGCTTC
GGCTACGCGA AGGGACGGTC GGTCTTTCGC AACGTCGATC TCGAGATCCG TGCCGGCGAC
ACCGTCGCCG TGGTCGGACC ATCCGGCACC GGCAAGACCA CGCTGTGTTC GCTGTTGCCG
CGGTTCTACG AGATCGAGGC CGGCTCCATC ACCATCGACG GCATCGACAT TCGCGATATG
ACGCTGGTGT CGCTGCGCAG TCAGATCGGC ATCGTGCAGC AGGACGTCTT CCTGTTCGGC
GGCTCGATCC GCGACAATAT CGTCTATGGC CGGCTCGGTG CTTCCGAAGC CGACATCCTC
GAAGCGGCGC GCCGGGCCCG CCTCGACGAC ATGATCGCGG CGATGCCGGA CGGGCTCGAC
ACCGTGATCG GCGAGCGCGG CGTCAAACTA TCGGGCGGCC AGAAGCAGCG GCTGGCAATC
GCACGGATGT TCCTGAAGAA CCCGCCGATC CTGATTCTCG ACGAAGCCAC CTCTGCGCTC
GACACCCGCA CCGAGCGGGA AATCCAGCGT TCGCTGGAGG AACTCTCGAG GGGGCGCACC
ACCCTGGTGA TCGCGCACCG GCTGGCGACA ATCCGCAATG CCGACCGCAT CGTGGTGGTC
GATCACAGCG GCATCGCCGA ACAGGGCACG CACGACGAGC TGATGCGACG GGGCGGGGCG
TACAGCAGCC TGCATGTGCT GCAATAG
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| Protein sequence | MLAKFFAYYR PWKTLFILDF SCAVVSALLE LGFPMAIRAF VDDLLPTQQW GLILLASAGL
LVIYLTNTAL IAVVVYWGHK LGINIETEMR RKAFDHLQKQ SFRFFDDNNS GHLVARVTKD
LEEIGEVAHH GPEDLFIAAM TFVGAFALMF AVNPKLALIT AAIVPLIAWI TSRYGAQMTA
NWQQIYSRVG DFNVRIVENV GGIRIVQAFA NEDHERRLFA RDNANYRRTK LEAYRIIAAS
SSLSYMGTRL IQLVVMVAGS YFVLRGELSN GGFVGFLLLV NVFFRPIDKM LSVIETYPKG
IAGFRRYLAL LESEPEIVDR PGAVSVTALR GDVRYSGVSF GYAKGRSVFR NVDLEIRAGD
TVAVVGPSGT GKTTLCSLLP RFYEIEAGSI TIDGIDIRDM TLVSLRSQIG IVQQDVFLFG
GSIRDNIVYG RLGASEADIL EAARRARLDD MIAAMPDGLD TVIGERGVKL SGGQKQRLAI
ARMFLKNPPI LILDEATSAL DTRTEREIQR SLEELSRGRT TLVIAHRLAT IRNADRIVVV
DHSGIAEQGT HDELMRRGGA YSSLHVLQ
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