| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4382 |
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| Symbol | |
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| ID | 3912197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4963887 |
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| End bp | 4965527 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637886288 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_487980 |
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| Protein GI | 86751484 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG ACACGCAGGA CATCGATCAC GCCCGGGCCG TGGCGGAGAA CCAGACTCGT
CTGCGCGCGC GATTGGCCGA CGGCTTCGAT TTCATCGTGT GCGGCGCCGG CTCGGCGGGC
TGCGTGGTCG CGGCGCGTCT GGCCGAGAAG CCCGACGTGC GGGTGCTGCT GCTCGAAGCC
GGCGACGGCG AGATGTCGCC CAGGCTCGTG GAGCCGGCGA TGTGGCCGAT GAATCTCGGC
ACCGAGCGCG ACTGGGCGTT CGAATCGCAG CCGACGCCGA CCCTGAACGG GCGGCGCCTT
CCGCTCAACA TGGGCAAGGG GCTCGGCGGC GGCTCGAGTA TCAACGTCAT GGTCTGGGCG
CGCGGTCACC GCGCGGATTG GGACTACTTC GCCGCCGAGG CGGGCGACGG CTGCTGGGGT
TACGAATCCG TGCTCGACAC CTATCGCCGC ATCGAGAGCT GGCAGGGCCA TCCCGACCTG
CGTCGGCGCG GGACCGGCGG CCCCGTGCAT GTCGAACAGC CGGCCCAGCC GCGGCCGGTC
GCCAGCGCGA TGGTCGAGGC CGCGAGCATG CTCGGCCTGC CGCGCTACGC CAGTCCGAAC
GGCGAGATGA TGGAATCCGC CGGCGGCGTG GCATACGCGG ATCTGCGGAT CAAGAACGGG
AAGCGGCAGT CGGTCCATCA GTCCTACACC TATCCGCGCA TGCACCAGCC GAACCTCACG
GTGCTGACCC ACGCGACCGT CGGCCGGCTC GTGCTGGACG GCCACAAGGC GGTCGGGGTG
CAGGCCCTGG TCGGCGATCG GCTGATGACC TTCGATGCGC GCCGCGAGGT CGTGCTGTCG
CTCGGTGCGA TCAACACGCC GAAGCTGCTG ATGCAGTCCG GCATCGGCCC CGAGGACGAA
CTGCGCGCCC ACGGCATCGA GGTGGTGCAG CATCTGCCGG GCGTCGGCCA AAATCATCAG
GACCATGTCG CCTTCGGCTG CACCTGGGAA TATCTGCGGC CGCAGGAGGT CGGCAGCGGC
GGGTGCGAGG CGAAACTGTA CTGGAAGAGC GATGCCCGCC TGGACGCGCC CGACATCCTG
CAGTGTCAGC TCGGATTCGC CGTGCCGTCG CCGGCCGAGG TGGGGATCGC GCCACCGCAG
CACGGCTGGA CGATGTTCGC CGGGCTGGCT CAGCCGAAGA GCCGCGGGCG TGTGCGGCTG
TCCGGGCCCG ATATCGGCGA CGCCATGCTG ATCGAGCCCA ACGCGCTCAG CGAGCCCGAG
GACATGGCCG CGGCGCGGGC GACCATCGAG CTCTGTCGCG AGATCGGCAA TCATCCGGCC
TTCGGCCGGC AGGTGCAGCG CGAGGTCGTG CCCCGGCTGG GCGACCGCCT GGCCATGGAC
CAGTTCATCC GAAACGCGGC GGTGACCTAC TGGCATCAAT GCGGCACCGC CAAGATGGGC
CGCGACGCGA TGGCCGTGGT CGACCGGCGG CTCCGGGTCT ACGGGATCGA GAATCTCCGG
ATCGCGGATG CGTCGATCAT GCCGCGGATC ACCTCCGGCA ACACGATGGC GCCCTGCGTC
GTGATCGGCG AGCGCGCCGC CGACATGATC TGCGCCGCGC ATGACGACTC GTTCGACGTC
GTCGAGCCCA TCGGCGCGTG A
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| Protein sequence | MTQDTQDIDH ARAVAENQTR LRARLADGFD FIVCGAGSAG CVVAARLAEK PDVRVLLLEA
GDGEMSPRLV EPAMWPMNLG TERDWAFESQ PTPTLNGRRL PLNMGKGLGG GSSINVMVWA
RGHRADWDYF AAEAGDGCWG YESVLDTYRR IESWQGHPDL RRRGTGGPVH VEQPAQPRPV
ASAMVEAASM LGLPRYASPN GEMMESAGGV AYADLRIKNG KRQSVHQSYT YPRMHQPNLT
VLTHATVGRL VLDGHKAVGV QALVGDRLMT FDARREVVLS LGAINTPKLL MQSGIGPEDE
LRAHGIEVVQ HLPGVGQNHQ DHVAFGCTWE YLRPQEVGSG GCEAKLYWKS DARLDAPDIL
QCQLGFAVPS PAEVGIAPPQ HGWTMFAGLA QPKSRGRVRL SGPDIGDAML IEPNALSEPE
DMAAARATIE LCREIGNHPA FGRQVQREVV PRLGDRLAMD QFIRNAAVTY WHQCGTAKMG
RDAMAVVDRR LRVYGIENLR IADASIMPRI TSGNTMAPCV VIGERAADMI CAAHDDSFDV
VEPIGA
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