| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4381 |
|---|
| Symbol | |
|---|
| ID | 3912196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4962493 |
|---|
| End bp | 4963548 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637886287 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_487979 |
|---|
| Protein GI | 86751483 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATGC CCGAACTCGT CATCGTCCTG GGATTTGCGC TCGGCGCCGC GCTCGGCGTG
GCCGGGTTGC TGAGCGGCTT CTGCCTGATG AGCGGGCTGC GCGACTACTG GACCCGCGAC
GACGGCCGCA AGCTGCGCAG CTTCGCGCTG GCGCTGGCCG TGGCGATCGC AGGCACGCAG
GCGATCGGCG GTGCCGGTCT CGTCGAACTC GACAAGTCGA TCTATCTGCA GCCGTCGTTC
TCGGCGCCGC TGATTTTTCT CGGCGGCCTC ATGTTCGGCA TCGGCATGGT GCTGGCGAAT
GGCTGCGCGT CGCGGGCGCT GATCCTGCTC GGCAAGGGCA ATCTGCGCTC GCTGGTGGTG
ATCGGCATCA TCGCGGTCGC GGCGCAGATC ACGCTGAAGG GGTTGCTGGC GCCGGCGCGG
CTCGCCGTCC TGCAATGGAC GCAAGTCACA CCCGGCCACG TCTCGGTGCC GGAGCTGCTC
GGCAGCTTCG GGATCGGCGA GAGCGTCGCG CGGATCGCGG CGGTGCTGAT CGTCAGCGGC
GCGCTGATCG CCTTCGCCTT CTCCGACCGC GCCTTCCGCA GGAGCCCCGG CCAGATCGCC
GCCGGCCTCG TCATCGGCCT GCTGGTGGTC GCGGGCTGGC TCACCACCGG CTGGATCGGC
GCCGACGACT TCAATCCGCT GCCGGTCACC TCGCTGAGCT TCGTCGCGCC GCTGGCCGAC
ACGCTGCAAT ACGCGATGCT GTCGACCGGG CTGTCGCTGT CCTTCGGCGT CGCACTGGTC
GCCGGCGTCC TCGCCGGCAG CGTCGCCACC GCGTTGCTGA GCGGGCGCTT TGCGCTGGAA
GGCTTCACCT CGGCGCCGCA TATGCTGCGC TCGGTCGCCG GCGCGGCGCT GATGGGCGCG
GGCGGCGCGA TGGCCTATGG CTGCTCGATC GGACAGGGCC TCACCGGCCT GTCGACGCTG
GCGCTGCCGT CCTTCATCGC CGTCGCCGGC ATCGTCGCCG GTGCTGCGCT CGGCATTCGC
CGCCTGGCGC CGGTCGCGGC GCTGGCGGTG CGCTGA
|
|---|
| Protein sequence | MQMPELVIVL GFALGAALGV AGLLSGFCLM SGLRDYWTRD DGRKLRSFAL ALAVAIAGTQ
AIGGAGLVEL DKSIYLQPSF SAPLIFLGGL MFGIGMVLAN GCASRALILL GKGNLRSLVV
IGIIAVAAQI TLKGLLAPAR LAVLQWTQVT PGHVSVPELL GSFGIGESVA RIAAVLIVSG
ALIAFAFSDR AFRRSPGQIA AGLVIGLLVV AGWLTTGWIG ADDFNPLPVT SLSFVAPLAD
TLQYAMLSTG LSLSFGVALV AGVLAGSVAT ALLSGRFALE GFTSAPHMLR SVAGAALMGA
GGAMAYGCSI GQGLTGLSTL ALPSFIAVAG IVAGAALGIR RLAPVAALAV R
|
|---|
| |