Gene RPB_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4372 
Symbol 
ID3912187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4956211 
End bp4957029 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID637886278 
Producthypothetical protein 
Protein accessionYP_487970 
Protein GI86751474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.692073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCCA TCGGATTAGC AGTGCTATCT GCGTTTGTGC TCTGCACAAT GCCGTTTCGC 
GTTCACGCCG AGGACGCCAG CGAAAAGGAG ATCGAGCGCT ATCGCGCGAT GATTTCCGAC
CCGATGTCGA ATCCCGGTTT CCTCGCGGTC GATCGCGGCG AGCAGCTCTG GGCCTCGAAG
CGCGGCAGCA ACAACGTCTC GCTCGAAGGC TGCGATCTCG GCCTCGGCGC CGGCAAGCTG
GACGGCGCCT TCGCGCAACT GCCGCGCTAC TTCAAGGACG CCGACCGGGT GATGGATCTC
GAGCAGCGCC TTCTCTGGTG CATGCAGAAC ATCCAGGGGC TCGATACCAA GGACGTCGTC
GCCCGACGCT TCTCCGGCCC CGGCCGGGTC TCCGATATGG AGGACCTGGT GGCGTTCATC
GCCAACAAGT CGAGCGGCAT GGCGATCGAG CCACAGCTCA AACATCCCAA GGAACAGGAA
ATGGCGGCGG TCGGCGAGGA GCTGTTTCAC CGTCGCGGCG GGGTGATGGA TTTCTCCTGC
TCGACCTGTC ACGGCGCCGA AGGCAAGCGC ATCCGGCTGC AGGGACTGCC GTATCTCGCC
GGCCCCGGCA AGGACGCCCA ACTGACGATG GCGAGCTGGC CGACCTATCG CGTGTCGCAG
AGCGCGCTGC GGACCTTCCA GCACCGGATC TGGGACTGCT ACCGCCAGCA ACGCTGGCCG
GCCCCGGAGT ACGGCTCCGA GGGCATCACC GCGCTGACAT CGTATCTCAA CAAGATCGCG
GCGGGCGGCG AACTCGTCGT TCCGTCCATC AAGCGCTGA
 
Protein sequence
MRSIGLAVLS AFVLCTMPFR VHAEDASEKE IERYRAMISD PMSNPGFLAV DRGEQLWASK 
RGSNNVSLEG CDLGLGAGKL DGAFAQLPRY FKDADRVMDL EQRLLWCMQN IQGLDTKDVV
ARRFSGPGRV SDMEDLVAFI ANKSSGMAIE PQLKHPKEQE MAAVGEELFH RRGGVMDFSC
STCHGAEGKR IRLQGLPYLA GPGKDAQLTM ASWPTYRVSQ SALRTFQHRI WDCYRQQRWP
APEYGSEGIT ALTSYLNKIA AGGELVVPSI KR