Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4372 |
Symbol | |
ID | 3912187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4956211 |
End bp | 4957029 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637886278 |
Product | hypothetical protein |
Protein accession | YP_487970 |
Protein GI | 86751474 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.692073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCCA TCGGATTAGC AGTGCTATCT GCGTTTGTGC TCTGCACAAT GCCGTTTCGC GTTCACGCCG AGGACGCCAG CGAAAAGGAG ATCGAGCGCT ATCGCGCGAT GATTTCCGAC CCGATGTCGA ATCCCGGTTT CCTCGCGGTC GATCGCGGCG AGCAGCTCTG GGCCTCGAAG CGCGGCAGCA ACAACGTCTC GCTCGAAGGC TGCGATCTCG GCCTCGGCGC CGGCAAGCTG GACGGCGCCT TCGCGCAACT GCCGCGCTAC TTCAAGGACG CCGACCGGGT GATGGATCTC GAGCAGCGCC TTCTCTGGTG CATGCAGAAC ATCCAGGGGC TCGATACCAA GGACGTCGTC GCCCGACGCT TCTCCGGCCC CGGCCGGGTC TCCGATATGG AGGACCTGGT GGCGTTCATC GCCAACAAGT CGAGCGGCAT GGCGATCGAG CCACAGCTCA AACATCCCAA GGAACAGGAA ATGGCGGCGG TCGGCGAGGA GCTGTTTCAC CGTCGCGGCG GGGTGATGGA TTTCTCCTGC TCGACCTGTC ACGGCGCCGA AGGCAAGCGC ATCCGGCTGC AGGGACTGCC GTATCTCGCC GGCCCCGGCA AGGACGCCCA ACTGACGATG GCGAGCTGGC CGACCTATCG CGTGTCGCAG AGCGCGCTGC GGACCTTCCA GCACCGGATC TGGGACTGCT ACCGCCAGCA ACGCTGGCCG GCCCCGGAGT ACGGCTCCGA GGGCATCACC GCGCTGACAT CGTATCTCAA CAAGATCGCG GCGGGCGGCG AACTCGTCGT TCCGTCCATC AAGCGCTGA
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Protein sequence | MRSIGLAVLS AFVLCTMPFR VHAEDASEKE IERYRAMISD PMSNPGFLAV DRGEQLWASK RGSNNVSLEG CDLGLGAGKL DGAFAQLPRY FKDADRVMDL EQRLLWCMQN IQGLDTKDVV ARRFSGPGRV SDMEDLVAFI ANKSSGMAIE PQLKHPKEQE MAAVGEELFH RRGGVMDFSC STCHGAEGKR IRLQGLPYLA GPGKDAQLTM ASWPTYRVSQ SALRTFQHRI WDCYRQQRWP APEYGSEGIT ALTSYLNKIA AGGELVVPSI KR
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