| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4364 |
|---|
| Symbol | |
|---|
| ID | 3912179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4948251 |
|---|
| End bp | 4949513 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637886270 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_487962 |
|---|
| Protein GI | 86751466 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.637254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG ACAGACGCCA ATTCTCGACC GGCCTGCTGG CCGCCAGTCT CATCGCCATG
CCCGGCGTGC TGCGCGCGCA GGCCAAGCCG CGCGTCGTGG TGATCGGCGG CGGGCCGGGC
GGCGCGACGG TGGCGAAATA CGTCGCCCGC GACTCCCAGG GCGCGATCGA CGTCACCATG
GTCGAGCCGC TGGAGCAGTT CATCACCTGC TTCCACTCCA ACCTGTTCCT CGGCGACATG
CGCAGCATGG CGTCGATCAC CCACCCCTAC AAGCTCGGCG GCTACGGCGT TAAGCACGTC
CGGCAGATGG CGGCGGCGAT CGACCGCGAC AAGAAGCAGG TCCGGCTCGC CGACGGCAGC
GTGCTCGACT ACGACCGGCT GGTGGTCGCG CCCGGCATCG ACATCAAGTT CGACTCGGTG
CCCGGCTATT CCGAGGCCGC CGCCGAGATC ATGCCGCACG GCTGGAAGCC CGGCGCGCAG
ACGCTGCTGG TGAAGAAGCA ACTCGACGCG CTGGAGGACG GCGCCACCAT CGTGATGCTG
GCGCCGCCGA ATCCGTATCG CTGCCCGCCC GGTCCGTACG AGCGGGTCTC GGTGATGGCG
ATGGTGCTGA AGGCCAAGGG CCACACCAAG TCGAAGATCA TCGTGATCGA TCCGAAGGAC
AAATTCTCCA AGATGGCGCT GTTCCAGGAG GGCTGGCAGA AGCACTATCC CGGCATGGTC
GAATGGATGG ACCCGAAGAT GCACGGCGGC CTGAAATCGG TCGATCCCAA GGCGATGACG
GTGACCACCG ATTTCGAAAC CATCAAGGCG TCGATGGTCA ACGTCATCCC GGCGCAGATG
GCCGGCAAGA TCGCGCGCGA TTCCGGCCTC GCCAATCCGT CCGGCTTCTG CCCGATCGAT
GCGGCCAGCA TGAAGTCGAC CATCGATCCC AACATCTACG TGCTCGGCGA TGCGGCGATC
GCCGGCGCGA TGCCGAAATC GGCGTTCTCC GCCAACAGCC AGGCCAAGGT GGTGGCGAAT
GCGGTGCGCG GCGACCTGAC CGGCGCGCGC ACCTTCCCGG CGCGCTATGC CAATACCTGC
TGGTCGGTGC TGGCCAAGGA CGACACCGTC AAGGTCGGCG GCCGCTACGA GCCGAAGGAC
GGCGCCATCG CCGAGGTCGA GGGCTTCGTC TCCAAGACCG GCGAGGAGTC CGGCCTGCGC
TTCCAGACCG CCGAAGAGAA CATGGGCTGG TATGCCGGCA TCACCGCCGA CATCTTCGCC
TGA
|
|---|
| Protein sequence | MTIDRRQFST GLLAASLIAM PGVLRAQAKP RVVVIGGGPG GATVAKYVAR DSQGAIDVTM
VEPLEQFITC FHSNLFLGDM RSMASITHPY KLGGYGVKHV RQMAAAIDRD KKQVRLADGS
VLDYDRLVVA PGIDIKFDSV PGYSEAAAEI MPHGWKPGAQ TLLVKKQLDA LEDGATIVML
APPNPYRCPP GPYERVSVMA MVLKAKGHTK SKIIVIDPKD KFSKMALFQE GWQKHYPGMV
EWMDPKMHGG LKSVDPKAMT VTTDFETIKA SMVNVIPAQM AGKIARDSGL ANPSGFCPID
AASMKSTIDP NIYVLGDAAI AGAMPKSAFS ANSQAKVVAN AVRGDLTGAR TFPARYANTC
WSVLAKDDTV KVGGRYEPKD GAIAEVEGFV SKTGEESGLR FQTAEENMGW YAGITADIFA
|
|---|
| |