| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4363 |
|---|
| Symbol | |
|---|
| ID | 3912178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4946921 |
|---|
| End bp | 4948192 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637886269 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_487961 |
|---|
| Protein GI | 86751465 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0121845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAAAC CGATCCTGAT CAGCCGTCGC GGCGTGATCC GCGCCGCCGC GGCATCCACG
GCGTTGCTCG CCTGCCCGGC GATCGCCAAA GCGCGTCCGA AGGTCGTGGT GATCGGCGGC
GGCGCCGGCG GCGCCACCGC GGCGAAGTAT CTGCGCCACG GCGACGATTC CGTCGAGGTG
ACGCTGGTCG AGGCCAACCG CATCTACGTC ACGCCGTTCA CGTCGAACCT GTATCTCGGC
GGGCTGAAGC CGTTCGAGGC GTTGAACTAC GGCTATGAGG GCATTGCGGC GCGCGGCGTC
GGCATGGTGT TCGACAGCGT CGCCGCGATC GACCGCGACG CCAAACAGGT GCGCACCGCG
AGTGGGGCGC GGCTGTCCTA CGACCGCCTG GTGCTGTCGC CCGGCATCGA TTTCCGCTGG
GACGCGATCC CCGGCTATTC CGAGGCCGCC GCCGAGACGA TGCCGCACGG CTATCGCGGC
AGCGCGCAGT TCCAGTTGCT GAAGCGCCGG CTCGACGCGC TGTCCGACGG CGCGCTGATC
GTGATCATCG CGCCGCCCAA TCCGTATCGC TGCCCGCCGG CGCCTTACGA GCGCGCCTCG
ATGATGGCCC ATGCGCTGAA GAGCCGGGGC GTGAAGAACG CCCGCATCGT CATCCTCGAC
GCCAAGGATC ATTTCGCGAT GCAGACGTTG TTCATCGACG GCTGGGAGCG GCATTATCCC
GGCATGATCG AATGGCAGGA CCCGACCATC CACGGCGGCA TCAAGGCAGT CGATCCGAAG
GCGATGACCG TGACCACCGA TTTCGAGACC CACAAGGCGG CGCTGGTCAA CGTCATCCCG
CCGCAGATCG CGGGGAAGCT CGCGCGCGAT TCCGGCCTCG CCGACGCCAG CGGCTTCTGC
CCGGTCGATG CCGGCACCAT GATCTCGCTG ATCGATCCGT CGATCCAGGT GATCGGCGAT
TCCGCGACCG GCGGTGAATT TCCCAAATCC GGCTTCGCCG CCAACAACGA GGCGAAGGGC
GCGGCGATGA TCCTGCGCGC CGAATTGCTC GGCGAGCGGC GGATGCCGAT CCGCTTCACC
AACCATTGCT GGAGCGACAT CGCCCCCGAC GACGCCGTCA AGAACGGCGC CCGCTACACC
CCGCAGGACG GCAAGATCGT GGCGTCCGAT CCCTACACCT CGCAGCTCGA CGAAAGCGCG
GAGCTGCGCG CCAAGCAGGC GCGCGAGGCG GCGGGCTGGT ACATCGGCAT GACGACGGAC
ATCTTCGGCT GA
|
|---|
| Protein sequence | MPKPILISRR GVIRAAAAST ALLACPAIAK ARPKVVVIGG GAGGATAAKY LRHGDDSVEV
TLVEANRIYV TPFTSNLYLG GLKPFEALNY GYEGIAARGV GMVFDSVAAI DRDAKQVRTA
SGARLSYDRL VLSPGIDFRW DAIPGYSEAA AETMPHGYRG SAQFQLLKRR LDALSDGALI
VIIAPPNPYR CPPAPYERAS MMAHALKSRG VKNARIVILD AKDHFAMQTL FIDGWERHYP
GMIEWQDPTI HGGIKAVDPK AMTVTTDFET HKAALVNVIP PQIAGKLARD SGLADASGFC
PVDAGTMISL IDPSIQVIGD SATGGEFPKS GFAANNEAKG AAMILRAELL GERRMPIRFT
NHCWSDIAPD DAVKNGARYT PQDGKIVASD PYTSQLDESA ELRAKQAREA AGWYIGMTTD
IFG
|
|---|
| |