Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4362 |
Symbol | |
ID | 3912177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4946236 |
End bp | 4946889 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886268 |
Product | ErfK/YbiS/YcfS/YnhG |
Protein accession | YP_487960 |
Protein GI | 86751464 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00426459 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCC GGTCGTTGCT CGCCCTCGCC GCCGTCGCCG TCACGCTCGG CGGCTGCGTC ACCCAGTCCG AAGCCGAACT CGATCTCGGC CCGCCGAAGA GCACGGTGGG GCCGGCGATC GCGGCGCGCT ATGCGGCGAT CGACACCGAC AAACACCCGA TCGCCGGCAT CGATCCGGAG GATCTGCAGC CGGCCTATGT ACGGCAGTTG GTCGACTACA AGACCGACGA GCCGCCGGGC ACCGTGGTGG TCGATCCGCA CCGGCGCTTT CTCTATCTGG TGATGGAAGG CGGCAAGGCG CTGCGCTACG GCGTCGGCGT CGGCAAGGCC GGGCTGGCAT TCAGCGGCAC CGCCCATGTC GGACGCAAGG CCGAATGGCC GCACTGGACC CCGACGAAGA ACATGATCGC CCGCGAGCCG CAGCGCTACG GCAAATGGGC GAGCGGCATG GACGGCGGCG CCACCAATCC GCTCGGCCCG CGGGCGCTGT ATCTGTTCAA GGACGGCAAG GACACGCTGT ACCGCATCCA CGGCACCACC GAGCCGGAGA CGATCGGCCA GGCGGTGTCG TCCGGCTGCA TCCGGATGCT GAACCAGGAC GTCATCGACC TGTACGCGCG CGTGCCGAAG GGCGCCAAGG TGGTGGTCAA ATAG
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Protein sequence | MSLRSLLALA AVAVTLGGCV TQSEAELDLG PPKSTVGPAI AARYAAIDTD KHPIAGIDPE DLQPAYVRQL VDYKTDEPPG TVVVDPHRRF LYLVMEGGKA LRYGVGVGKA GLAFSGTAHV GRKAEWPHWT PTKNMIAREP QRYGKWASGM DGGATNPLGP RALYLFKDGK DTLYRIHGTT EPETIGQAVS SGCIRMLNQD VIDLYARVPK GAKVVVK
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