Gene RPB_4362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4362 
Symbol 
ID3912177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4946236 
End bp4946889 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID637886268 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_487960 
Protein GI86751464 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00426459 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCC GGTCGTTGCT CGCCCTCGCC GCCGTCGCCG TCACGCTCGG CGGCTGCGTC 
ACCCAGTCCG AAGCCGAACT CGATCTCGGC CCGCCGAAGA GCACGGTGGG GCCGGCGATC
GCGGCGCGCT ATGCGGCGAT CGACACCGAC AAACACCCGA TCGCCGGCAT CGATCCGGAG
GATCTGCAGC CGGCCTATGT ACGGCAGTTG GTCGACTACA AGACCGACGA GCCGCCGGGC
ACCGTGGTGG TCGATCCGCA CCGGCGCTTT CTCTATCTGG TGATGGAAGG CGGCAAGGCG
CTGCGCTACG GCGTCGGCGT CGGCAAGGCC GGGCTGGCAT TCAGCGGCAC CGCCCATGTC
GGACGCAAGG CCGAATGGCC GCACTGGACC CCGACGAAGA ACATGATCGC CCGCGAGCCG
CAGCGCTACG GCAAATGGGC GAGCGGCATG GACGGCGGCG CCACCAATCC GCTCGGCCCG
CGGGCGCTGT ATCTGTTCAA GGACGGCAAG GACACGCTGT ACCGCATCCA CGGCACCACC
GAGCCGGAGA CGATCGGCCA GGCGGTGTCG TCCGGCTGCA TCCGGATGCT GAACCAGGAC
GTCATCGACC TGTACGCGCG CGTGCCGAAG GGCGCCAAGG TGGTGGTCAA ATAG
 
Protein sequence
MSLRSLLALA AVAVTLGGCV TQSEAELDLG PPKSTVGPAI AARYAAIDTD KHPIAGIDPE 
DLQPAYVRQL VDYKTDEPPG TVVVDPHRRF LYLVMEGGKA LRYGVGVGKA GLAFSGTAHV
GRKAEWPHWT PTKNMIAREP QRYGKWASGM DGGATNPLGP RALYLFKDGK DTLYRIHGTT
EPETIGQAVS SGCIRMLNQD VIDLYARVPK GAKVVVK