Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4358 |
Symbol | |
ID | 3912173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4941643 |
End bp | 4942983 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637886264 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_487956 |
Protein GI | 86751460 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.66153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGCT CGCTGCGCCT TCGGCTGTTT CTGGTGCTGT TCGGCGCCAC CGGCATCGTC TGGATCGCCG CGGTGATGTG GATCTACACG AGCAGCCAGC GCGAGCTCGA ACACGTGCTC GACGCGCGGC TGCAGGAGGC GGCCCGCATG GTGGTGTCGC TGGTCGGCAA CATGGAGGGC CGTGTTCCGG AAGCGCTGCC GGATGTGCCG GCGGCGCCGG CGACGCCAGG CAATTACGAG CGGCAATTGT CCTGCCAGGT GTGGTCGGTG CAGGGCCGGC TGATCGCGCG CTCGGGCGGT GCGCCGGAGC AGAGTCTCAG CGATCAGGGG GCGGGATTTT CCGAGCGGCA GATCGACGGC GAAACCTGGC GGATCTATGC GACGGAGGAC GCCGCCCGCG GCTTTCGCGT GCTGGTCGGC GACCGGCTCG GCTTGCGCGA GCGGCTCGTC GCCGATCTGA TCAAGGGATT GCTGTGGCCG GCGCTGCTGA TCGCGCCGCT GCTCGGCCTG CTGATCTGGA TCAGCGTCGG CCGCGGGCTG CGACCGCTGC AGGCGATTGC GTCGGATCTG GTCGGGCGCG ACGCCGACGA CATGCGGCCG GTCGATGCCA GCCGCACCCC CTCCGAAGTG ATGCCGCTCG CCCGCGCGCT GAACGCGCTG TTCGACAAGG TCGCGCTGGC GCGGCGTCAC GAGCGCGAGA TCACCGCCTT CGCGGCGCAC GAGCTGCGCA GTCCGCTCAC CGGCCTCAAG ACCCAGGCGC AAGTCGCGCT GGCGACCACC GATCCGGCGG TGGCGCGGGC GGCGCTGCAG CAGATCCTGG TCGCGGTCGA TCGCGCCACC CGGCTGGTGC GCCAGTTGCT GACGCTGGCG CGGCTCGACG CCCAGGCCGG GACCGACGAT CACGGCAGCG TCGCGATCCG GCCGCTGATC GACGAGGTGG CGCGGATGAC GCCGCGCCCG GCCGGCGTCG CGGTGGTGAT CGACGACGAT CTCGCCGGCG CCGACTGGCG CGGCAATCGC GAATGTCTCG AACTGGCGAT CCGCAATCTG CACGAGAATG CGATCCAGCA CATGCCGGGC GGCGGCGAGG TGCGCTGGCG CGCCGGCGCG TCGCCGCGAT CGGTGGTGAT CGAGGACAGC GGTCCCGGCG TGCCGGAGGA CGAATTGCCG AAACTCGGTC AGCGCTTCTT CCGCGGGCGA AACAAATCGG CGATCGGCAG CGGCCTCGGC CTGACCATCG CGGCGCTGGC GCTGGAGCGC ACCGGCGCGG AGCTGCAGTT CGGCAACCGC CCCGACCGCC GCGGTTTTCG CGCCGAAATC GTCCTGCGCC GAACGGTGTG A
|
Protein sequence | MIGSLRLRLF LVLFGATGIV WIAAVMWIYT SSQRELEHVL DARLQEAARM VVSLVGNMEG RVPEALPDVP AAPATPGNYE RQLSCQVWSV QGRLIARSGG APEQSLSDQG AGFSERQIDG ETWRIYATED AARGFRVLVG DRLGLRERLV ADLIKGLLWP ALLIAPLLGL LIWISVGRGL RPLQAIASDL VGRDADDMRP VDASRTPSEV MPLARALNAL FDKVALARRH EREITAFAAH ELRSPLTGLK TQAQVALATT DPAVARAALQ QILVAVDRAT RLVRQLLTLA RLDAQAGTDD HGSVAIRPLI DEVARMTPRP AGVAVVIDDD LAGADWRGNR ECLELAIRNL HENAIQHMPG GGEVRWRAGA SPRSVVIEDS GPGVPEDELP KLGQRFFRGR NKSAIGSGLG LTIAALALER TGAELQFGNR PDRRGFRAEI VLRRTV
|
| |