Gene RPB_4347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4347 
Symbol 
ID3912161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4931383 
End bp4932540 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content70% 
IMG OID637886252 
Producthypothetical protein 
Protein accessionYP_487945 
Protein GI86751449 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0794792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0502044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGC GACTCGCTGT TTCCGGCTAC CGATCGCTGC GCGACGTGCG GCTGTCGCTC 
GGTCCGCTCA ACGTCGTCAC CGGCGCCAAC GGCACTGGCA AATCGAGCCT GTATCGGGCG
CTGAAGCTGC TCGCGGACAT CGCGCAGGGC CGGGTGATCC AGTCGCTCGC CGCCGAGGGC
GGGCTGCCGT CGACATTGTG GGCCGGGCCC GAAACGCTGT CGCGGTCGAT GAAGCAGGGC
GTGCATCCGG TGCAGGGCAC GACGCGCAGC AAGCGGGTCG GCCTCAAGCT CGGCTTTGCC
GGCACCGACT ACGGCTATGC GATCGACCTC GGATTGCCGC AGGCGCCGAA CAGTTCGTTG
TTCGCGCGCG ATCCCGAGAT CAAGGCCGAG AGCGTGTGGA CCGGCGAACT GCTCGGCCGC
GCCAATGCGT TTGCCGAACG CCGTGGCCCC TCGGTGCGGG TGCGCGACGA GGGCGGCCAG
TGGCGGGAGA CCTACCGGAC GCTCGCCACC TTCGACAGCA TGATGACGCA CTGCGCCGAT
CCCAAGGATG CGCTGGAACT GCTGCTGCTG CGCGAGCGCA TGAACGGCTG GCGGTTCTAC
GATCAACTGC GCACCGACCG CGATGCCCCG GCGCGGCGGC CGCAGATCGG CACCTACACG
CCGGTGCTGG CGAGCGACGG CGCCGATCTC GCCGCCGCGA TTCAGACCAT CATCGAGATC
GGCAATCCGG ACCAGCTCGA CGACACCGTC GCCGACGCCT TTCCCCGCGC GCGCCTCGCC
GTCGCGGCCC TCGACGGCTA TTTCGAACTG GAGATGCAGC AGCACGGCTT GCTCCGCCCG
TTGAAGGCGG CCGAACTGTC GGACGGCACG TTGCGCTATC TGCTGCTGGT CGCGGCGCTG
CTGTCGCCGC GGCCGCCGGA CCTGATGATC CTGAACGAAC CCGAGGCGAG CCTGCACCCC
GATCTGCTGG CGCCCTTGGC CCGGCTGATT GCGGCGGCTG CGGAGCGGTC GCAGATCATC
GTGGTCTCGC ACGCGCCCGG CCTGGTGTCG GCGCTGGACC GCACAGCCGA CAGCCGGCGG
ATCGTGCTGG AGAAGCAACT GAGCGAGACC CTCGTGCAGG ACGACACGCC GCCCGCCTGG
GCGTGGCCGT CGCGCTAG
 
Protein sequence
MITRLAVSGY RSLRDVRLSL GPLNVVTGAN GTGKSSLYRA LKLLADIAQG RVIQSLAAEG 
GLPSTLWAGP ETLSRSMKQG VHPVQGTTRS KRVGLKLGFA GTDYGYAIDL GLPQAPNSSL
FARDPEIKAE SVWTGELLGR ANAFAERRGP SVRVRDEGGQ WRETYRTLAT FDSMMTHCAD
PKDALELLLL RERMNGWRFY DQLRTDRDAP ARRPQIGTYT PVLASDGADL AAAIQTIIEI
GNPDQLDDTV ADAFPRARLA VAALDGYFEL EMQQHGLLRP LKAAELSDGT LRYLLLVAAL
LSPRPPDLMI LNEPEASLHP DLLAPLARLI AAAAERSQII VVSHAPGLVS ALDRTADSRR
IVLEKQLSET LVQDDTPPAW AWPSR