| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4326 |
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| Symbol | |
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| ID | 3912139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4908470 |
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| End bp | 4910380 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637886230 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_487924 |
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| Protein GI | 86751428 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.471144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCC AGGACAAGAG CCGTTATCGC GAGGTTCATG CCCGCTCGCT GGCCGACCCC
GAGGGCTTCT GGGCCGAGGC CGCGCGCGAG ATCGACTGGA TCGTGCCGGC CACCAAAGTG
TTCGATCCCT CGCAAGGCCT GTACGGCCGC TGGTTCGCCG GCGCCAAGGT CAACACCTGC
TACAACGCGC TCGACCGCCA CGTCGCCAAC GGCCGCGCCG ACCAGGTGGC GCTGATCCAC
GATTCGCCGC TGACCGGCAC GATCAGCACC TTCACCTATG CGGAGATGCT GCGCGAAGTG
CAGGCGCTCG CCGCGGTGAT GCAGGATTTC GGCGTGGAGA AGGGCGACCG CGTCATTCTC
TACATGCCGA TGGTGCCGGA ATCGATGGTG GCGATGCTGG CCTGCGCCCG CATCGGCGCG
GTGCATTCGG TGGTGTTCGG CGGCTTCGCG GCGAAAGAAC TCGCCACCCG GATCGACGAC
GCCAAGCCGA AGCTGATTCT CTCCGCGAGC TGCGGCATCG AGCCCGGCCG CATCGTCAAG
TACAAGCCGC TGCTCGACGA GGCGATCGGC CTGTCCTCCG CCAAGCCCGA CGCCTGCATC
ATCCTGAAGC GGCCGCAGCA GGATTGCGAC CTGGTCGAAG GCCGCGATCA CGATTGGGGC
AAGCTGCGCT CCGAGGCGCT CGCCGCCGGC AAGACGGCCG AATGCGTCGC GGTCGACGCC
ACCGATCCGC TCTACATCCT CTACACCTCG GGCACCACCG GCAAGCCGAA GGGCGTAGTG
CGGGACAATG GCGGCCATCT GGTCGCGCTG AAATGGTCGA TGGAGAATCT CTACGGCGTC
AAGCCCGGCG AGGTGTGGTG GTGCGCCTCC GACATCGGCT GGGTGGTCGG CCACAGCTAC
ATCATCTACG GCCCGCTGAT CCATGGCGCG ACCTCGATCA TGTATGAAGG CAAGCCGGTC
GGCACGCCGG ACCCCGGCGC GTTCTGGCGG GTGATCGCCG AGCACGGCGC TGTGGCGCTG
TTCACGGCGC CGACGGCGTT TCGAGCGATC CGCAAGGACG ATCCCGACGG CAGCTTCATG
CGCAAATACG ATCTGTCGAA ACTGCGCACG CTGTTCCTGG CCGGCGAGCG CGCCGATCCG
CCGACGGTGG AATGGGCCGA GCAGCAATTG AAGGTGCCGG TGATCGATCA CTGGTGGCAG
ACCGAAACCG GCTGGTGCAT CGCCGGCAAT CCGGTCGGAT TGGGTCTGTT GCCGGTCAAG
CACGGCTCGC CGACGGTGCC GATGCCGGGT TACGACGTCC GGGTGGTGGA CGAGGGCAGC
AAGCCGGTGC CCGCCGGCAC CATGGGCTCG ATCGTGATCA AGCTGCCGCT GCCGCCCGGC
AACCTGCCGA CGCTGTGGCA GCAGGACGAG CGCTGCCGCG AGAGCTACTT CGCCGACTTT
CCCGGTTACT ACAAGACCTC CGACGCCGGC TACATGGACG AAGACGGCTA CGTCTTCGTG
ATGGGCCGCA CCGACGACAT CATCAACGTC GCCGGCCATC GGCTCTCGAC CGGCGGCATG
GAGGAGATTC TCGCCTCGCA TCCGGACGTC GCCGAATGCG CCGTGCTCGG CATCAACGAC
ACCATCAAGG GTGAAGTGCC CTGCGGTCTC ATCGTGCTGA AGAGCGGCGT CACCCGCGAT
CACGCCGAGA TCGAGAAGGA GATCGTCAAG CTGGTGCGCG ACAAGCTCGG CCCGGTCGCC
GCCTTCAAGC TGGCGATCAC CGTGCCGCGG CTGCCCAAGA CCCGCTCCGG CAAGATCCTG
CGCGGCACCA TCAAGAAGAT CGCCGACGGC GACGAATGGG CGATGCCGGC CACGATCGAG
GACCCGACCG CGCTCGACGA CATCTCCTCG GCGCTGAAGA GCCATAGCTG A
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| Protein sequence | MNIQDKSRYR EVHARSLADP EGFWAEAARE IDWIVPATKV FDPSQGLYGR WFAGAKVNTC
YNALDRHVAN GRADQVALIH DSPLTGTIST FTYAEMLREV QALAAVMQDF GVEKGDRVIL
YMPMVPESMV AMLACARIGA VHSVVFGGFA AKELATRIDD AKPKLILSAS CGIEPGRIVK
YKPLLDEAIG LSSAKPDACI ILKRPQQDCD LVEGRDHDWG KLRSEALAAG KTAECVAVDA
TDPLYILYTS GTTGKPKGVV RDNGGHLVAL KWSMENLYGV KPGEVWWCAS DIGWVVGHSY
IIYGPLIHGA TSIMYEGKPV GTPDPGAFWR VIAEHGAVAL FTAPTAFRAI RKDDPDGSFM
RKYDLSKLRT LFLAGERADP PTVEWAEQQL KVPVIDHWWQ TETGWCIAGN PVGLGLLPVK
HGSPTVPMPG YDVRVVDEGS KPVPAGTMGS IVIKLPLPPG NLPTLWQQDE RCRESYFADF
PGYYKTSDAG YMDEDGYVFV MGRTDDIINV AGHRLSTGGM EEILASHPDV AECAVLGIND
TIKGEVPCGL IVLKSGVTRD HAEIEKEIVK LVRDKLGPVA AFKLAITVPR LPKTRSGKIL
RGTIKKIADG DEWAMPATIE DPTALDDISS ALKSHS
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