| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4307 |
|---|
| Symbol | |
|---|
| ID | 3912120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4892223 |
|---|
| End bp | 4892807 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637886211 |
|---|
| Product | PadR-like family transcriptional regulator |
|---|
| Protein accession | YP_487905 |
|---|
| Protein GI | 86751409 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.362143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGCA TCGACAACGG CTTGCGGCGA TGCGGCTCCG GATGCCGCTG GGGCCGCCGT
GGCTTCGGCG GGCGTGGCGC CGGCAACGGC GAGACGACCC GCGCCGGCCG GATGCTGGCG
CAGGGCGACC TCAAACTGAT CGCGCTGGCG CTGATCGCCG AGCAGCCGCG CCACGGCTAC
GACATCATCA AGGTGATCGA GGAGAAGACC GCGGGCTGGT ACGCGCCGAG CCCCGGCGTG
GTGTACCCGA CGCTGACCTA TCTGGAGGAG ATGGGCCACG TCGTCGCGCA GCCGGAAGGC
GCCAAGAAAC TCTACGTCAT CACCGACGAC GGCCGCGATC AGCTCGCGGC GAACCGCGTG
CTCGCCGACG CGGTGTTCGA GCGGCTGGCC AGCTTCGGCG AAATGATGCG CCAGCAGACC
GGCAATGGGG GCGGCGCCGA GGGCGGCGAT GTTCCGCCGC TGCTGCGCGC CGCGCTCGAC
AATCTGCGCG ACGTGGCGAT CCGGCAGATC GCCAAGGACG CGGACAATGA AGCCGAGCTG
GTCGCGATTC TCGCGCGCGC GGCGGGTGAA CTACGCAAAG TTTAG
|
|---|
| Protein sequence | MEGIDNGLRR CGSGCRWGRR GFGGRGAGNG ETTRAGRMLA QGDLKLIALA LIAEQPRHGY
DIIKVIEEKT AGWYAPSPGV VYPTLTYLEE MGHVVAQPEG AKKLYVITDD GRDQLAANRV
LADAVFERLA SFGEMMRQQT GNGGGAEGGD VPPLLRAALD NLRDVAIRQI AKDADNEAEL
VAILARAAGE LRKV
|
|---|
| |