Gene RPB_4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4297 
Symbol 
ID3912110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4883242 
End bp4884507 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content70% 
IMG OID637886201 
Productoxidoreductase FAD/NAD(P)-binding 
Protein accessionYP_487895 
Protein GI86751399 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.65431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCCC CCGCCGCGGC GCTGCAACGC TGGTCGATCC CGCTGCTCAC GCTTTCCGTG 
CCGCTCGGAT TCGTGGCGTG GGCGTTTCCG ACAGGCCTCG CGCCGCTGCG CGCGGCCGGC
ATCGTCACCG GCTGGCTCGG CTGCGGGCTG CTGCTGGTGA GCCTGCTGCT GATGCTGCGC
GAGCCGCGGC TCGCCTATTG GCTCGGCGGG CTGGAGCGGA TGTATCGCTG GCATCACGTC
ACCGGCGTCG TCGCTTATGT GGCGCTGCTG CTGCATCCGC TCGCGCTCGC CGCCGGCAAT
CTCGCCGCGT CGCCGCGCCT CGCCTGGCAG ACGTTGTCGC CGGCGACGGA GAGCTGGCAG
GTGTGGTCGG GTTGGCTCGG CCTGCTGCTG TTGATGGTCG GCCTCGCCAC CACTTTCACC
CCGAGCATCC GCTACGGCCT GTGGCGCTGG CTGCACGCGC TGCTCGGTAT CGGCGTGGTG
ATCGGTCTCG TGCATCTGAT CCTGCTCGGC ATCGACGAGC CGGTGCTGCC GATCCTCGCG
GCGGCGGCAG GAATCCTCGG CTGGCGGCTG CTGCGCGGCG ATCTCGGCCT CGCGGCGCGG
CCCTATATCG TCGCGGCGGT GCGCAAGCTG ACGCCGCAGT CCGTCGAGAT CGAATTGCGC
CCGCTGGCCG ATCCGGTGAC CGTGACCGCC GGGCAATTCG TGCTGGTCGC GTTCGGCAAC
GGCCCGCTGT ATCGCGGCTG CGGCGAATTC CATCCCTTCA CCATCAGCGC GATCGATCGC
GACGGCGCGC TGCGCCTGGC GGTGAAGGCG CTCGGCGATT GTACGCGGCG AATGCTGTCG
ATCGAGCCCG GCGTCGCGGC GCGGGTGATC GGCGGCTTCG GCGGCCTGCT CGGCGACGCC
GGCGCATCGC CGCAATTGTG GATCGCCGGC GGCATCGGCG TCACGCCGTT CGTCGCTCTG
CTGAACGAGG GCAGGCTGCG CCAGCCGGTG CGGCTGCTGT ATCTGTATCG CCGCGAGGCC
GATGCGACCT ATCTGCCGGA GCTGCGCGCG ATCGCGGCAT CCGATCCGCA ACTGAAATTG
CAGGCGGTCG CCACCGGCGA CGATCTGCCC GATCTCGATC GCCTGCTGCC CGCTACCAGC
GAGTTGTCAG GCGTCGAGTG CTATCTGTGC GGGCCGGCGG GCCTGGTCGC GGCGCTGCAG
CGGGCGCTCG GCGCGCGCGG GGTCGCCGCC CAGCACATCC ACTTCGAAAA CTTCGAGTTC
AGATAA
 
Protein sequence
MASPAAALQR WSIPLLTLSV PLGFVAWAFP TGLAPLRAAG IVTGWLGCGL LLVSLLLMLR 
EPRLAYWLGG LERMYRWHHV TGVVAYVALL LHPLALAAGN LAASPRLAWQ TLSPATESWQ
VWSGWLGLLL LMVGLATTFT PSIRYGLWRW LHALLGIGVV IGLVHLILLG IDEPVLPILA
AAAGILGWRL LRGDLGLAAR PYIVAAVRKL TPQSVEIELR PLADPVTVTA GQFVLVAFGN
GPLYRGCGEF HPFTISAIDR DGALRLAVKA LGDCTRRMLS IEPGVAARVI GGFGGLLGDA
GASPQLWIAG GIGVTPFVAL LNEGRLRQPV RLLYLYRREA DATYLPELRA IAASDPQLKL
QAVATGDDLP DLDRLLPATS ELSGVECYLC GPAGLVAALQ RALGARGVAA QHIHFENFEF
R