| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4294 |
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| Symbol | |
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| ID | 3912107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4878519 |
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| End bp | 4881599 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886198 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_487892 |
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| Protein GI | 86751396 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.200453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCGC GTCTGGTCGA GTTCTCGCTC GCGCATCGCC TGCTGGTGGT GCTGGCCACC
CTGCTGCTGA TCGGCGCTGG GATCTATGCG GTGCGCGGCC TGCCGATCGA TGCCTTCCCG
GACGTCTCGC CGGTGCAGGT CAAGATCATC ATGAAGGCGC CGGGCATGAC GCCCGAGGAG
GTCGAGACCC GGGTGACGGC GCCGCTCGAG CTGGAAATGC TCGGCATCCC CAACAAGACC
ATCCTGCGCT CGACCACCAA ATACGGCCTC GCCGACGTCA CCATCGATTT CGCCGACGGC
GTCGATATCT ACTGGGCGCG CAATCAAGTC GCCGAACGGC TCGCCGCGGC GATGAAGGAC
ATGCCGGACG GCCTGACCGG CGGCATGGCG CCGATCACCA CGCCGCTCGG CGAGATGTTC
ATGTTCACCA TCGCCGGCGG CGACCTGTCG CTGGCCGAAC GGCGCACGCT GCTCGACTGG
ACGATCCGTC CGGCGCTGCG CACGCTGCCC GGCGTCGCCG ACGTCAATTC GCTCGGCGGC
TATGTCCGCT CGTTCGAGAT CGTCCCCGAC AATCTGGCGA TGGCGTCGCG CGGCATTTCC
ATCGACATGC TGGAGAAGGC GATCAAGGCC AACAACCGCA ATGGCGGCGC CGGCCGGCTG
TCCGCCGGCG AGGAAGTGCT GCTGGTCCGC GTCGACGGCC AGGTCCGCAC GCTCGACGAT
CTGCGCAACA TCGTGCTGGC CTCGCGCGAC GGCGGCATGG TGCGGGTGCG CGACGTCGCC
GAGGTGCGGA TCGGCAGCAT CACCCGCTCC GGCGCCGTGA CGCGCGACGG GCAAAGCGAG
GCGGTGCAGG GCCTGGTGCT CGGCCTGCGC GGCGCCAATG CCCGCGACGT CGTCGAGGGC
GTCCGCGCCA AATTCGCCGA GCTCGCGCCG ACGCTGCCGA AGGGCGTGAC GCTCGACGTG
TTCTACGATC GCGGCGATCT GGTCGGCCGC GCCATCAGCA CGGTGTCGAA ATCGCTGCTC
GAAGCCACCG TGCTGGTGAT CCTGCTGCTG GTCCTGTTTC TCGGCGACTG GCGCGCCGCT
CTGGTGGTGG CGCTGACGCT GCCGCTGTCG GCGCTCGCCA CCTTCGTGCT GATGCGCTGG
GCCGGGATGT CCGCCAACCT GATGAGCCTC GGCGGGCTCG CGGTGGCGAT CGGCATGCTG
ATCGACGCCG CCGTCGTGGT GGTCGAGAAC ATCGTCTCGC ATCTGGCGCA CGACCGCCAC
GGCGCGCGGG TGCCGCTGCT GCACCGGATC TACCAGGCGC TGCGCGAAGT CGTGGTGCCG
GTGACGTCGG GCATCGCCAT CATCGTCATC GTGTTCCTGC CGCTGCTGAC GCTGCAGGGG
CTGGAAGGCA AGCTGTTCAT TCCGGTGGCG CTGTCGATCG TGTTCGCGCT CGGCTCCTCG
CTGCTGCTGG CGCTGACGGT GGTGCCGGTG CTGGCGTCGC TGCTGCTACG CACCTCCGGC
CATCACGACA CCTGGCTGGT TCGCAAGATC AGCGCGGCCT ATGCGCCGGT GTTGCATTTC
GCGTTGCGCC GCGAAAAGGC GGTGCTGGCG GTCGCGGTGC TGGCGCTGGT CGCGACCGGC
TTCGCCTATG TCCAGCTCGG CAAGATCTTC ATGCCGACGA TGGAGGAAGG CACGCCGATC
CTCAGCGTCG AGAAACTGCC CTCGGTGAGC CTCGAGGCGA GCGTCGATCT CGACCTGAAG
ATTCAGAAGG CGGTGATGGC GGCGGTGCCC GAGGTTTCGA GCATCGTCGC GCGCGTCGGC
TCCGACGAAA TCGGCCTCGA TCCGATGGGG CTCAATCAGA CCGATACTTA CGTCATCCTG
AAGCCGCCGT CGGAATGGCG CCGGCCGGAC GACAAGGACT GGCTGATGGG CGAGATCCGC
AAGGCGCTCG CCGAGTTTCC CGGCATCGGC TTCAGCTTCA CCCAGCCGAT CGAGATGCGC
GTGCAGGAGA TGATCATCGG CGCCCGCGGC GACGTGGTGG CGAAGATCTT CGGCACCGAC
ATCGCCACGC TGAACAGCCT CGCCGAACAG ATCACGGCGA CGATGAAGAC GCTGAAGGGC
GCCGAGGACG TCCGCACCAC GCTGAACGAG GGCTTCGAGT ATTACAGCAT CGGGATCGAC
CGGCTGCAGG CCGGACGGCT CGGGCTCGAC GTCGACCAGC TCACCAGCGC GCTGCGCACC
CAGATCGACG GCCAGCCGGT CGGCATCGTC GTCGAGGAGG GCCGCCGCAC CCCGATCTCG
ATCCGCGGCA CCGACGCCTT GCGGGAATCG CCGGCGCGGC TCGCCGGCCT CAGCCTGGTG
ATCGCCGACG GCAAATCGGT GCCGCTCACC AATGTGGCGC GGCTGGAGCG GATCGACGGC
CCGGTCAAGA TCGACCGCGA GAACGGGCAG CGGCTGGCGC TGGTGATGAG CAACGTCACC
GGTCGCGATT TGGTCGGCTT CGTCGACGAG GCCAAGGCCG CGGTCGCCGC GCGGGTCAAA
TTGCCGGAGG GCTACCGCAT CGTCTGGGGC GGCCAGTTCG AGAACCAGCA GCGCGCCGCC
GCAAGGCTCG CCATCGTGGT GCCGATCGCG CTGGCGCTGG TGTTCCTGCT GCTGTTCGTC
ACCTTCGCGT CGCTGCGGCA AGCGCTGCTG GTGTTCGTCA ACATTCCGTT CGCGCTGGTC
GGCGGCGTGT TCAGCCTGCT GGTCTCCGGC GAGTATCTGT CGGTGCCGGC CTCGGTCGGC
TTCATCGCGC TGCTCGGCAT CGCGGTGCTG AACGGGCTGG TGCTGGTGAC CTATTTCAAC
ACGCTGCGCG GTCAGGGCCT GTCGCCGGAT CAGATCGTCG AGCTCGGCTC GCAGCGCCGG
CTGCGGCCGA TCCTGCTCAC CGCCAGCATC ACCGCGTTCG GGCTGGTGCC GCTGCTCTAC
GCCACCGGCC CGGGCGCCGA CGTGCAGCGT CCGCTGGCGA TCGTGGTGAT CGGCGGGCTG
GTGTCGTCGA CGCTGCTGAC GCTGGTGATC CTGCCGGTGC TGTATCGCCG TTTCGGCATC
GTGGCGGAGA AGGCGGCATG A
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| Protein sequence | MLARLVEFSL AHRLLVVLAT LLLIGAGIYA VRGLPIDAFP DVSPVQVKII MKAPGMTPEE
VETRVTAPLE LEMLGIPNKT ILRSTTKYGL ADVTIDFADG VDIYWARNQV AERLAAAMKD
MPDGLTGGMA PITTPLGEMF MFTIAGGDLS LAERRTLLDW TIRPALRTLP GVADVNSLGG
YVRSFEIVPD NLAMASRGIS IDMLEKAIKA NNRNGGAGRL SAGEEVLLVR VDGQVRTLDD
LRNIVLASRD GGMVRVRDVA EVRIGSITRS GAVTRDGQSE AVQGLVLGLR GANARDVVEG
VRAKFAELAP TLPKGVTLDV FYDRGDLVGR AISTVSKSLL EATVLVILLL VLFLGDWRAA
LVVALTLPLS ALATFVLMRW AGMSANLMSL GGLAVAIGML IDAAVVVVEN IVSHLAHDRH
GARVPLLHRI YQALREVVVP VTSGIAIIVI VFLPLLTLQG LEGKLFIPVA LSIVFALGSS
LLLALTVVPV LASLLLRTSG HHDTWLVRKI SAAYAPVLHF ALRREKAVLA VAVLALVATG
FAYVQLGKIF MPTMEEGTPI LSVEKLPSVS LEASVDLDLK IQKAVMAAVP EVSSIVARVG
SDEIGLDPMG LNQTDTYVIL KPPSEWRRPD DKDWLMGEIR KALAEFPGIG FSFTQPIEMR
VQEMIIGARG DVVAKIFGTD IATLNSLAEQ ITATMKTLKG AEDVRTTLNE GFEYYSIGID
RLQAGRLGLD VDQLTSALRT QIDGQPVGIV VEEGRRTPIS IRGTDALRES PARLAGLSLV
IADGKSVPLT NVARLERIDG PVKIDRENGQ RLALVMSNVT GRDLVGFVDE AKAAVAARVK
LPEGYRIVWG GQFENQQRAA ARLAIVVPIA LALVFLLLFV TFASLRQALL VFVNIPFALV
GGVFSLLVSG EYLSVPASVG FIALLGIAVL NGLVLVTYFN TLRGQGLSPD QIVELGSQRR
LRPILLTASI TAFGLVPLLY ATGPGADVQR PLAIVVIGGL VSSTLLTLVI LPVLYRRFGI
VAEKAA
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