| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4283 |
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| Symbol | |
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| ID | 3912096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4867549 |
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| End bp | 4869009 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637886188 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_487882 |
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| Protein GI | 86751386 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGA CGGAGCGCGC CGGAGGGCAT TCCGGCGCGC CGAGCCTCGA TCCCGACGAC
TGGGAGAGCC TCCGCGCCGA TGCGCACCGG ATGCTCGACG ACGTCATCGA CTCCATCGCC
GATGTGCGCG AGCGGCCGGT GTGGCAGCCG ATCCCCGACG ACGTGCGCGC GCGCTTCGGC
GAGACGCTGC CGCGCGGGGA AACGCCGCTC GGCGAGGTGT ATCAGGAGTT CTCGAACAGC
ATCGCGCCCT ATGCGACCGG CAATGTGCAT CCCGGCTTCA TGGGCTGGGT GCATGGCGGC
GGCACCGCCG TGGGCATGCT CGCCGAGATG CTGGCCGCAG GACTGAACGC CAATTGCGGC
GGCCGCGACC ACATCGGCCT CGAGGTCGAG CGCCAGATCG TACGCTGGGT GCGCGAATTG
TTCGGCTTCC CGAAGACCGC GAGCGGGCTG TTCGTCACCG GCTCGTCGAT GGCGAACTTC
ATGGCGCTGC TGGTGGCGCG GACCGCCGCG CTCGGGCCGC AGGTGCGCGA GGGCGGACTA
TCGGGTGAAC CGCTCACCGC CTACGCCTCG GCCGCGGCCC ATGGCTGCGT GGTGCAGGCC
GCCGATCTCG CCGGACTCGG TCGCGGCGCG GTGCGGCGGA TCGCGTTCGA CGCCGCGCAT
CGCATCGACA TCGCCGCGCT GCGCCGGCGG ATCGCCGAGG ACCGCGCCGC CGGATTCAGG
CCGTTCCTGG TGACCGGCTC GGCCGGCACC GTCGACACCG GCGCGATCGA CGATCTCGCC
GCGCTGGCGC AGCTCTGCCG CGACGAAGGG CTGTGGTTTC ACGTCGACGG CGCCTATGGC
GCGCTCGGGA TGCTGTCGCC GCAGATCGCG CCGATGCTCG CAGGCTTGAG CGAAGCGGAT
TCGGTCGCGC TCGACTTTCA CAAATGGGGC CAGGTCAATT ACGACGCCGG CTTCCTGATC
GTGCGCGACG GCGAGCAGCA TCGCGCCACC TTCGCGGCGC CGGCCGCCTA TCTACGCCGC
GAGACCCGGG GGCTCGCCGC CGGCTCGCCC TGGCCGTGCG ACTACGGGCC GGACCTGTCG
CGCGGCTTCC GCGCGCTGAA GACCTGGTTC ACGCTGAAGA CCTACGGCGC CGAGCGCCTC
GGCGCGATGA TCGCCCACAC CTGCGCGGTG GCGCGGCATC TCGAAGCCCG GGTGCAGCGC
GAGCCGAAAC TCGAACGACT GGCGCCGGTC GCCCTCAACA TCGTCTGCTT CCGTCATCGA
ACGTCATCGG GCGATGCCGA CGCGCTCAAC GCCGAGATCG TCGCCGACCT GCACGAATCC
GGGATCGCCG CGCCGTCTTC GACCACGATC GGCGGCCAGC TCGCGATCCG CGCCGCGATC
GTCAATCACC GGTCCACGTG CGCGGACGTC GACCGGATGG TCGATGCGGT GCTCACATTC
GGCGCGCAAC GGCAGCGATA G
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| Protein sequence | MSETERAGGH SGAPSLDPDD WESLRADAHR MLDDVIDSIA DVRERPVWQP IPDDVRARFG
ETLPRGETPL GEVYQEFSNS IAPYATGNVH PGFMGWVHGG GTAVGMLAEM LAAGLNANCG
GRDHIGLEVE RQIVRWVREL FGFPKTASGL FVTGSSMANF MALLVARTAA LGPQVREGGL
SGEPLTAYAS AAAHGCVVQA ADLAGLGRGA VRRIAFDAAH RIDIAALRRR IAEDRAAGFR
PFLVTGSAGT VDTGAIDDLA ALAQLCRDEG LWFHVDGAYG ALGMLSPQIA PMLAGLSEAD
SVALDFHKWG QVNYDAGFLI VRDGEQHRAT FAAPAAYLRR ETRGLAAGSP WPCDYGPDLS
RGFRALKTWF TLKTYGAERL GAMIAHTCAV ARHLEARVQR EPKLERLAPV ALNIVCFRHR
TSSGDADALN AEIVADLHES GIAAPSSTTI GGQLAIRAAI VNHRSTCADV DRMVDAVLTF
GAQRQR
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