Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4272 |
Symbol | ruvC |
ID | 3912085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4855962 |
End bp | 4856558 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886177 |
Product | Holliday junction resolvase |
Protein accession | YP_487871 |
Protein GI | 86751375 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0821163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTGGGG ATGATCCCGT CGTCCAAACC GTTTCTGTTT CGTTCACGTC TATCTGGCGT TATCACTGCG CCATGAGCCT TCCGCCGATT CGCACCGCTG TCCGCATCCT GGGGATCGAC CCCGGCCTTC GCCGCACCGG CTGGGGCGTG GTCGAGAGCG ACGGCAATCG GCTGGTGTTC GTGGCCTGCG GCTCGGTCGA ACCGAAGGAC ACGTTGACGC TGGCGGAGCG GCTGCTGGCG ATCCATCATG GGCTCGAGAA GGTGCTGGCC GAGTTCGCGC CGGCGGAGGC CGCGGTCGAG CAGACCTTCG TCAACAAGGA CGGCGCCGCC ACGCTGAAGC TCGGCCAGGC GCGGGGCGTG GCGATGCTGG CGCCGGCGAT GCACGGCATT CTGGTCGCCG AATACGCGCC CAACCAGGTC AAGAAGACGG TGGTCGGCGC CGGCCATGCC GACAAGGTCC AGATCCAGAT GATGCTGAAG ATATTGCTGC CCAAGGCCGA TCCGCGCACC GCGGACGCCG CCGACGCCCT CGCCATCGCC ATCACCCACG CCCACCACCG CGTCGCCGCG CAGCGGCTGA GGGCGGTGGG GGGATGA
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Protein sequence | MGGDDPVVQT VSVSFTSIWR YHCAMSLPPI RTAVRILGID PGLRRTGWGV VESDGNRLVF VACGSVEPKD TLTLAERLLA IHHGLEKVLA EFAPAEAAVE QTFVNKDGAA TLKLGQARGV AMLAPAMHGI LVAEYAPNQV KKTVVGAGHA DKVQIQMMLK ILLPKADPRT ADAADALAIA ITHAHHRVAA QRLRAVGG
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