| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4268 |
|---|
| Symbol | |
|---|
| ID | 3912081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4852521 |
|---|
| End bp | 4853012 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637886173 |
|---|
| Product | 4-hydroxybenzoyl-CoA thioesterase |
|---|
| Protein accession | YP_487867 |
|---|
| Protein GI | 86751371 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGT TGATAGCTTC CGCTTCTGCA ATACAGGTAG AACAAGTGTC CCATCCCCTC
GACGGCGCCA TCATCGACGG CGCTCACCAC ATGCAGGTCC GCGTCTATTA CGAAGACACC
GACTTCTCTG GCATCGTCTA TCACGCCAAC TATCTGCGCT TCATGGAGCG CGGGCGGACC
AATTATCTGC GGCTGCTCGG CGCGGCGCAG AGCGAATTGT TCGCCGAAGC CGAGAGCGAG
ACACCGGGCT TCGCCTTCGT GGTGCGGGCG ATGCAGCTCG ATTTCCTGAA GTCCGCCAAG
ATGGACGATC TGCTCGACGT GATCACCCGC CCCGTAGAAG TCCGCGGTGC GTCGATCACC
ATGCAGCAGG AAATCAGACG GGACGAACTG CTGCTGCTGA AAGCCAGCGT CAAGGTCGCC
TTCGTCTCCG GCGGTCGCGC CCGCCCGATC CCGGTACCAT TACGGGTGGC GATGAAAGCC
GACGTCGCCT GA
|
|---|
| Protein sequence | MTTLIASASA IQVEQVSHPL DGAIIDGAHH MQVRVYYEDT DFSGIVYHAN YLRFMERGRT
NYLRLLGAAQ SELFAEAESE TPGFAFVVRA MQLDFLKSAK MDDLLDVITR PVEVRGASIT
MQQEIRRDEL LLLKASVKVA FVSGGRARPI PVPLRVAMKA DVA
|
|---|
| |