Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4267 |
Symbol | |
ID | 3912080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4851117 |
End bp | 4852475 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886172 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_487866 |
Protein GI | 86751370 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACACG GAACGCACCG GCGGTCCGCT ACGTTGGGAT GCATCATGAC CGAGACAACA CCCCACAGGA TCGTCATCGT CGGCGGCGGC GCCGGCGGGC TCGAGCTCGC CACCGCGCTC GGCGACAAAT ACGGCAAGTC CGATAATGTG CGCGTCACGC TGGTCGATCG CAGCCGCACC CACATCTGGA AGCCGCTGCT GCACGCGATC GCCGCCGGCT CGTTGCGCCG CTCGCAGCAC GAGCTCAACT ATCTGGCGCA GGCGCATTGG CACGGGTTCC ACTACCGGCT CGGCGAAATG GTCGGGCTCG ATCGCGCCGC GAAGACGATC ACGCTCGCCC CGGTGATCGA CGAGGAGGGG CGCGAGATCA ATCCCGCCAG CAGCCTCGGC TACGACACGC TGGTGGTGGC GGTCGGCAGC GTCACCAATG ATTTCGGCAC GCCCGGAGCA AAGGAGCACG CGGTGCCGCT GGAGACGCCG GAGCAGGCGA CGCGGTTCAA CCGCCGCATG GTCAATGCCT GCCTGCGGGC GCAGCATCAA CACACGCCGA TCGCGCCCGG TCAGCTCCAC GTCGCGATCA TCGGCGCCGG CGCCACCGGA ACCGAACTCG CCGCCGAACT GCACCACACC GCGCGCGAGA TCATCGCCTA CGGCCTCGAC AAGATCGATC CCGAGCACGA CCTCAAGATC GTGCTGATCG AGGCCGCCGA CCGCATCCTG CCGGCGCTGC CGCCGCGGAT TTCGCAGGCG ACGCTGAAGC TGCTGCAGGA TCTCGGCGTC GAGGTGCGGA CCAAGGCGCG GGTCGCCGAG GTGCTGGTCG ACGGCATCCG TCTCGCCGAC GGCGAGGTGG TTCCGTCGGA ACTGGTGGTA TGGGCCGCCG GCGTGCGCGC GCCGGATTTC CTCAAGGACA TCGACGGGCT CGAGACCAGC CGCATCAATC AGCTGGTGGT CCGGCCGACG CTGCAGACCA GCCGCGACGA CGACGTGTTC GCGCTCGGCG ATTGCGCCGC CTGCGCGATT CCCGGCTACG AGAACGGCAT TCCGCCGCGC GCCCAGGCGG CGCATCAGGA AGCCGAATTC ATGCTGGCGC AGATCGACAG GCGGCTGAAG GGCGAAGCGC TCGGCGGGTT TCAATATCGC GATTTCGGCT CGCTGGTGTC GCTCGGCAAA TATTCGACCG TCGGCAGCCT GATGGGCTCG CTGGTGAGCA AGAGCTTCAT GATCGAGGGC TATTTCGCGC GCTTCATGTA CAACTCGCTG TACAAGATGC ACGAGGCGGC GTTGTACGGC CGCAGCCGGA CGCTGCTCAG CATGTTGTCC GGCGCGACGC GGCCGACGCC GACGGTGAAA TTGCATTGA
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Protein sequence | MLHGTHRRSA TLGCIMTETT PHRIVIVGGG AGGLELATAL GDKYGKSDNV RVTLVDRSRT HIWKPLLHAI AAGSLRRSQH ELNYLAQAHW HGFHYRLGEM VGLDRAAKTI TLAPVIDEEG REINPASSLG YDTLVVAVGS VTNDFGTPGA KEHAVPLETP EQATRFNRRM VNACLRAQHQ HTPIAPGQLH VAIIGAGATG TELAAELHHT AREIIAYGLD KIDPEHDLKI VLIEAADRIL PALPPRISQA TLKLLQDLGV EVRTKARVAE VLVDGIRLAD GEVVPSELVV WAAGVRAPDF LKDIDGLETS RINQLVVRPT LQTSRDDDVF ALGDCAACAI PGYENGIPPR AQAAHQEAEF MLAQIDRRLK GEALGGFQYR DFGSLVSLGK YSTVGSLMGS LVSKSFMIEG YFARFMYNSL YKMHEAALYG RSRTLLSMLS GATRPTPTVK LH
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