Gene RPB_4267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4267 
Symbol 
ID3912080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4851117 
End bp4852475 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content67% 
IMG OID637886172 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_487866 
Protein GI86751370 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACACG GAACGCACCG GCGGTCCGCT ACGTTGGGAT GCATCATGAC CGAGACAACA 
CCCCACAGGA TCGTCATCGT CGGCGGCGGC GCCGGCGGGC TCGAGCTCGC CACCGCGCTC
GGCGACAAAT ACGGCAAGTC CGATAATGTG CGCGTCACGC TGGTCGATCG CAGCCGCACC
CACATCTGGA AGCCGCTGCT GCACGCGATC GCCGCCGGCT CGTTGCGCCG CTCGCAGCAC
GAGCTCAACT ATCTGGCGCA GGCGCATTGG CACGGGTTCC ACTACCGGCT CGGCGAAATG
GTCGGGCTCG ATCGCGCCGC GAAGACGATC ACGCTCGCCC CGGTGATCGA CGAGGAGGGG
CGCGAGATCA ATCCCGCCAG CAGCCTCGGC TACGACACGC TGGTGGTGGC GGTCGGCAGC
GTCACCAATG ATTTCGGCAC GCCCGGAGCA AAGGAGCACG CGGTGCCGCT GGAGACGCCG
GAGCAGGCGA CGCGGTTCAA CCGCCGCATG GTCAATGCCT GCCTGCGGGC GCAGCATCAA
CACACGCCGA TCGCGCCCGG TCAGCTCCAC GTCGCGATCA TCGGCGCCGG CGCCACCGGA
ACCGAACTCG CCGCCGAACT GCACCACACC GCGCGCGAGA TCATCGCCTA CGGCCTCGAC
AAGATCGATC CCGAGCACGA CCTCAAGATC GTGCTGATCG AGGCCGCCGA CCGCATCCTG
CCGGCGCTGC CGCCGCGGAT TTCGCAGGCG ACGCTGAAGC TGCTGCAGGA TCTCGGCGTC
GAGGTGCGGA CCAAGGCGCG GGTCGCCGAG GTGCTGGTCG ACGGCATCCG TCTCGCCGAC
GGCGAGGTGG TTCCGTCGGA ACTGGTGGTA TGGGCCGCCG GCGTGCGCGC GCCGGATTTC
CTCAAGGACA TCGACGGGCT CGAGACCAGC CGCATCAATC AGCTGGTGGT CCGGCCGACG
CTGCAGACCA GCCGCGACGA CGACGTGTTC GCGCTCGGCG ATTGCGCCGC CTGCGCGATT
CCCGGCTACG AGAACGGCAT TCCGCCGCGC GCCCAGGCGG CGCATCAGGA AGCCGAATTC
ATGCTGGCGC AGATCGACAG GCGGCTGAAG GGCGAAGCGC TCGGCGGGTT TCAATATCGC
GATTTCGGCT CGCTGGTGTC GCTCGGCAAA TATTCGACCG TCGGCAGCCT GATGGGCTCG
CTGGTGAGCA AGAGCTTCAT GATCGAGGGC TATTTCGCGC GCTTCATGTA CAACTCGCTG
TACAAGATGC ACGAGGCGGC GTTGTACGGC CGCAGCCGGA CGCTGCTCAG CATGTTGTCC
GGCGCGACGC GGCCGACGCC GACGGTGAAA TTGCATTGA
 
Protein sequence
MLHGTHRRSA TLGCIMTETT PHRIVIVGGG AGGLELATAL GDKYGKSDNV RVTLVDRSRT 
HIWKPLLHAI AAGSLRRSQH ELNYLAQAHW HGFHYRLGEM VGLDRAAKTI TLAPVIDEEG
REINPASSLG YDTLVVAVGS VTNDFGTPGA KEHAVPLETP EQATRFNRRM VNACLRAQHQ
HTPIAPGQLH VAIIGAGATG TELAAELHHT AREIIAYGLD KIDPEHDLKI VLIEAADRIL
PALPPRISQA TLKLLQDLGV EVRTKARVAE VLVDGIRLAD GEVVPSELVV WAAGVRAPDF
LKDIDGLETS RINQLVVRPT LQTSRDDDVF ALGDCAACAI PGYENGIPPR AQAAHQEAEF
MLAQIDRRLK GEALGGFQYR DFGSLVSLGK YSTVGSLMGS LVSKSFMIEG YFARFMYNSL
YKMHEAALYG RSRTLLSMLS GATRPTPTVK LH