Gene RPB_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4262 
Symbol 
ID3912075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand- 
Start bp4846947 
End bp4847627 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID637886167 
ProductTetR family transcriptional regulator 
Protein accessionYP_487861 
Protein GI86751365 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACAAA AATCACGCGC GCCGTCGCGC GCCGCCGCCA AGCCGAAATC GCCGGCAATG 
CCCGACGCCG CGCCGGCGCC GAAGAAGCGC GGCCGGCCGC GCAGCTACGA GCCCGAGCAG 
GCACTCGGCC AGGCGCTCGA TCTGTTCCGG CAGAGCGGCT TTGCGGCGAC GTCGCTGGAC 
GAATTGTCCG CCGCCACCGG CCTCAACCGG CCGAGCCTGT ACGGCGCGTT CGGCGACAAG 
CGCGAGCTCT ACATCAAGAG TTTCGCGCGC TATCGCTCGG ACGCCCGCGC CCGGATCACC 
GAGGCCATCG CCGGCGAGGC GCCGGTGCGG CAGCGGCTGA AGCGGCTTTA TGACGCCACG 
CTCGACATTT ACCTGTCGGG CGAAAATGGC CCACGCGGCT GCTTCACGGT GATGACCGCG 
GCCTCCGAGG CGATGGCCGA TCCGGAGATC CGCGCGATGG TGCAGGACAC GCTCGGTGAA 
CTCGACAGGG CCTTCGCCGG CCTGCTGCGT CAGGCGCAAC AGCAGGGCGA GCTGCCGTCC 
TCCGCCGATC CGCAGTTGCT CGGCCAACTC GCGGCTGCGA CCGTCCATAC GCTGTCGGTC 
CGCGCCCGCG CCGGCACGCC GCGCCCGGCG CTGGACCAGA TCGCGGACGC GGCGATCGAG 
TTGATCTGCG GCCCGGCCTG A
 
Protein sequence
MVQKSRAPSR AAAKPKSPAM PDAAPAPKKR GRPRSYEPEQ ALGQALDLFR QSGFAATSLD 
ELSAATGLNR PSLYGAFGDK RELYIKSFAR YRSDARARIT EAIAGEAPVR QRLKRLYDAT 
LDIYLSGENG PRGCFTVMTA ASEAMADPEI RAMVQDTLGE LDRAFAGLLR QAQQQGELPS 
SADPQLLGQL AAATVHTLSV RARAGTPRPA LDQIADAAIE LICGPA