Gene RPB_4258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4258 
Symbol 
ID3912071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4844127 
End bp4844429 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content66% 
IMG OID637886163 
Productexcinuclease ABC subunit C 
Protein accessionYP_487857 
Protein GI86751361 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00754458 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCT ACGTCTACAT GCTGCACTGT TCGGACGGCT CGTACTACGT CGGCAGCGCG 
ACGGGGGATG ATCTGTCCGC GCGGATCGAT CAGCACAATG CCGGCGCCTT CCCCGGCTAC
ACGTTCGTCC GTCGACCGGT CACACTGGTC TGGTCGCAGC ATTTCGACCG CATCACCGAC
GGCATCGCCG CCGAGCGGCA GATCAAAGGC TGGGGTCGGG CCAAGAAGGA AGCGCTGGCA
AGGTCCGATT GGGACGGCGT GCAGCAATTG GCGCGTCGCC GCGGCGGCAA GCCAGCGCGG
TGA
 
Protein sequence
MGIYVYMLHC SDGSYYVGSA TGDDLSARID QHNAGAFPGY TFVRRPVTLV WSQHFDRITD 
GIAAERQIKG WGRAKKEALA RSDWDGVQQL ARRRGGKPAR