| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4253 |
|---|
| Symbol | |
|---|
| ID | 3912066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4839488 |
|---|
| End bp | 4840336 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637886158 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_487852 |
|---|
| Protein GI | 86751356 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC CGCCCTCGCC GCCGTCGCTG ACCGAGCTGC GCCAGGAGAT CGACGGCATC
GACGCGCAGG TCCATCAGTT GCTGATGCAG CGCGGCGACA TCATCGACCG GCTGATTTCG
GTGAAGCAGA CCCAGGAGGT CGGCTCGGCG TTCCGCCCGG CGCGCGAGGC CGACATGATG
CGGCGGCTGG TGCAGCGCCA CCACGGCATC CTGCCGCTCG ACACCGTGGA GAGCATCTGG
CGGGTGATCA TCGCCACCTT TACTTATGTC CAAGCGCCGT TCGCCGTGCA TGTCGACCAG
TCGCTGGGCG AATCCGCGAT GCGGGATTCG GCCCGGTTCC ATTTCGGCTT CACGGTGCCC
TATGTGCCGC ATTTCTCGGC CTCCGCGGCG GTCGAGGCGG TGGCGCGCTC CAAGGGCGAC
CTCGCTTTGG TGTCGGCGAC CTCCGGCAGC AATCCGTGGT GGCTGGCGCT GGAGGCCGCA
GGCGCCCCGA AGATCATCGC CCGGCTGCCC TTCATCGAGC GCGCCGACCA TCCGGCGGCG
CTGCCGGTCT TCGTGGTGTC GCGGGTCGCG GACAGCGCCA TGGTCACCGA GGTCGAGACC
TGGAGCATCC GGGTGTCGGG CTGGAATGCC GAGATCGCCC GGGCGATCTC GCCGCTGGCC
GAAGTCGTGG CGGTGCCGGA TACCGCTTTT GACGGCGCGG CGCTGCTGGT GTCGATTTCC
GCCCCCGGCG GCCTCGACAA TATCAAGGCT GCCCTGATCG CAGCGGGGGC CTCGGTGCGC
TCATCGGGCC TCGTCGGCAG CCACGCGAGG CGCTATACGG TGCCCCCGAG CGGCAAGGCC
CCGACCTGA
|
|---|
| Protein sequence | MTKPPSPPSL TELRQEIDGI DAQVHQLLMQ RGDIIDRLIS VKQTQEVGSA FRPAREADMM
RRLVQRHHGI LPLDTVESIW RVIIATFTYV QAPFAVHVDQ SLGESAMRDS ARFHFGFTVP
YVPHFSASAA VEAVARSKGD LALVSATSGS NPWWLALEAA GAPKIIARLP FIERADHPAA
LPVFVVSRVA DSAMVTEVET WSIRVSGWNA EIARAISPLA EVVAVPDTAF DGAALLVSIS
APGGLDNIKA ALIAAGASVR SSGLVGSHAR RYTVPPSGKA PT
|
|---|
| |