Gene RPB_4250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4250 
Symbol 
ID3912063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4836003 
End bp4836875 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID637886155 
Producthypothetical protein 
Protein accessionYP_487849 
Protein GI86751353 
COG category 
COG ID 
TIGRFAM ID[TIGR02594] conserved hypothetical protein TIGR02594 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGT TTACTGCGTT CGCGTTCGGT CGCGTAGTTG TGTTGGGTCT GGGTATCGCG 
GCGATCGCCG CATTGGCGTC CCCCGCATCG GCCCGGCCGT TGCATCGTCA TCATGGTCAC
ACCGTTTCTC ACTACGGCGA TCACAGCGCG TCGGTTCGCG GCGCTCATCG CGCGTCCCGC
AGCGCGTATC GCCACCAGCG CGCCGCCAAG CGCCATCGCG CCGTGCGCCG CGCGCCGCAG
GCGGCGACCG GCGGCTTTGC TCAGCCGCAG CAGTTCGGCT TCGATCAGGG GCGTCATGAT
CAGGGGCAGA ACTATTCGCT CAGCTACGCG CAGAACCAGG CGCAGAATTT CACGCCCGGC
GGCGCTTCCA CGTTTTCGTC CAACTACTCC GACGGCATCC ATGCGCCGCG CGTGACCAAG
CAGCGCGTCT CGCGGCGCGC CGTGCGGGCT CGGGCGATGG CGCAACAGAC GGAGCCGCAG
CAGATGCAGA CGCAGAGCTG GGCCGGTAGC GGCGGTGGCG GCAATTCGAG CCTGGTCGCC
GAGGCGCGCC GCTACATCGG CGGCAACCCG ACCGGCCGCA GCCGGCTGTG GTGCGCGCGG
TTCATGAACA TGGTGCTGGA GCGCGCGGGC CATCGCGGCA CCGGCTCCGA CATGGCGAGT
TCGTTCGCCC GTTACGGCCA GCGCATCTCC GGCCCGCAGG TCGGCGCCAT CGCGGTGATG
TCGCGCGGCA AGCGCGGCGG CCATGTCGGC ATCGTCAGCG GCATCGATTC CAGCGGCAAT
CCGATCGTCG TCTCCGGCAA TCACGGCCGC CGCGTCGCCG AGTCGGTGTA CTCCAAGAGC
CGCATCTACG CCTATGTGAT GCCGTCGAGC TGA
 
Protein sequence
MVEFTAFAFG RVVVLGLGIA AIAALASPAS ARPLHRHHGH TVSHYGDHSA SVRGAHRASR 
SAYRHQRAAK RHRAVRRAPQ AATGGFAQPQ QFGFDQGRHD QGQNYSLSYA QNQAQNFTPG
GASTFSSNYS DGIHAPRVTK QRVSRRAVRA RAMAQQTEPQ QMQTQSWAGS GGGGNSSLVA
EARRYIGGNP TGRSRLWCAR FMNMVLERAG HRGTGSDMAS SFARYGQRIS GPQVGAIAVM
SRGKRGGHVG IVSGIDSSGN PIVVSGNHGR RVAESVYSKS RIYAYVMPSS