Gene RPB_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4248 
Symbol 
ID3912061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4833956 
End bp4834726 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID637886153 
ProductMOSC 
Protein accessionYP_487847 
Protein GI86751351 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.13041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATAC CATCCCCGGC GTCTCTCACC TCGATCTATC GCTATCCCGT CAAGGGCCTG 
TCGCCCGAGC CGCTGGCCGA AGTGGCGCTG CGGGTCGGCC AGACGCTGCC GGCCGACCGC
GCTTATGCGA TCGAGAACGG GCCGACCGGC TTCGATCCGG CCAATCCGGT GTGGAAGGCG
AAGGTCCATT ATCTCATGCT GATGCGCAAC GAGCGGCTGG CCGCGCTGCG AACGCATTAC
GACGACGCCA CCGCCATGCT GACGATCCGC CAGGACGGCG CCGAGGCCGC CCGCGGCGAC
CTGCGCACGG TCGAGGGCCG CGCCGCGATC GAGGCGTTCT TTGCCGCGCG CTTTGCCGAC
GAGCTGAAGG GGCCGCCGAA GGTTCTGGAC GGCAAAGGCT ACAGTTTCTC CGACGTGCCG
ATGAAGGTGC TGTCCGTCAT CAACCTCGCC AGCGTCGCGG CGCTGGAGGA GATGACGGGG
CACAAGGTCG ACCCGCTGCG CTTCCGTGCC AACCTCTATG TCGAAGGCTG GCCCGCCTGG
GCCGAGCTCG ACATGATCGG GCAGACTCTG GCGATCGGCG ACGCGCGGCT GAAGATCGTC
AAGCGCACCG TCCGCTGCGC CGCCACCAAT GTCGACCCGG TCACCGCCGC GCGCGACATG
AAGATTCCCG AAACACTGCA GCGCCAGCTC GGCCACGCCG ATTGCGGGGT GTATGCCGAA
GTGATCGAAG GCGGACGAAT CGCGAGGGGC GATGCGGTAG GGTTCGACTG A
 
Protein sequence
MTIPSPASLT SIYRYPVKGL SPEPLAEVAL RVGQTLPADR AYAIENGPTG FDPANPVWKA 
KVHYLMLMRN ERLAALRTHY DDATAMLTIR QDGAEAARGD LRTVEGRAAI EAFFAARFAD
ELKGPPKVLD GKGYSFSDVP MKVLSVINLA SVAALEEMTG HKVDPLRFRA NLYVEGWPAW
AELDMIGQTL AIGDARLKIV KRTVRCAATN VDPVTAARDM KIPETLQRQL GHADCGVYAE
VIEGGRIARG DAVGFD