| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4247 |
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| Symbol | |
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| ID | 3912060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4831092 |
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| End bp | 4833731 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886152 |
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| Product | AAA_5 ATPase |
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| Protein accession | YP_487846 |
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| Protein GI | 86751350 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0997657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.754892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAG AAAAATACAC CGAACGCGTG CGCGGCTTCG TCCAGTCGGC GCAATCCCTG
GCGGTCCGCG AGGGCCATCA GCAATTCTCG CCGCTGCATA TTCTCAAAGT CCTGCTCGAT
GATTCCGAGG GGCTGGCCGG CGGTCTGATC GACCGCTCCG GCGGCAATTC CCGCGCGATC
CTGAAGGCGA CCGAAGACGC GCTCGGCAAG ATGCCGAAGG TCTCCGGCTC GGGCGCCGGC
CAGGTCTATC TGGCGCCGGC GACGGCGCGC GCGCTCGACG GCGCCGAGCA GGCCGCCGAA
AAGGCCGGCG ACAGCTTCGT CACCGTGGAG CGGCTGCTGC TGGCGCTGTC GCTCGACAAA
GATTCCGAGG CCGGGCAGTT GCTCGCCAAG GGCGGCGTCA CCCCGCAGAA TCTCAACGCC
GCGATCAACG CGCTGCGCAA GGGCCGCACC GCGGACAGCG CCACGGCCGA AAACGCCTAT
GACGCGCTGA AGAAATACGC CCGGGATCTC ACCCAGGCGG CGCGCGACGG CAAGCTCGAC
CCGGTGATCG GCCGCGACGA GGAAATCCGC CGGACGATCC AGGTGCTGTC GCGCCGCACC
AAGAACAATC CCGTCCTGAT CGGCGAACCC GGCGTCGGCA AGACCGCGAT CGTCGAGGGT
CTGGCGCTGC GCATCCTCAA TGGCGACGTG CCGGAGAGCC TGAAGGACAA GAAGCTGCTG
GCGCTCGACA TGGGCGCGCT GATCGCGGGC GCGAAATATC GCGGCGAGTT CGAGGAGCGG
CTGAAGGCCG TGCTCAACGA GGTCACCGCG GCCGCCGGCG GCATCGTGCT GTTCATCGAC
GAGATGCACA CGCTGGTCGG CGCCGGCAAG GCCGACGGCG CGATGGATGC GTCCAATCTG
CTGAAGCCCG CGCTGGCGCG CGGCGAGCTG CACTGCATCG GCGCCACCAC GCTCGATGAA
TATCGCAAGC ACGTCGAGAA GGACGCCGCT TTGGCGCGGC GGTTCCAGCC GGTGTTCGTG
TCCGAGCCGA CCGTCGAGGA CACCATCTCG ATCCTGCGCG GCCTGAAGGA CAAATACGAG
CAGCATCACG GCGTGCGCAT TGCCGATTCG GCGCTGGTGG CCGCCACCAC GCTGTCGAAT
CGCTACATCA CCGATCGCTT CCTGCCCGAC AAGGCGATCG ACCTGATGGA CGAGGCCGCG
GCGCGGCTGA AGATGCAGGT CGATTCCAAG CCGGAAGAAC TCGATTCGAT GGACCGCGAG
ATCGTGCGGC TCAAGATCGA GCAGGAGGCG CTGAAGAAGG AGAGCGACGC CGGCTCCAAA
TCGCGCCTCG TCACGCTGGA AAAGGAGCTC GCCGATCTCG AGGAGAAGTC GGCCGCGCTG
ACGCAGCGCT GGAGCGCGGA GAAGAACAAG CTCTCGGACG CCCAGAAGCT GAAGAGCGAG
CTCGACGGGT TGCGGCTCGA ACTCGCCGAC GCGCAGCGTC GCGGCGAGTA TCAGCGCGCC
GGCGAACTGG CCTATGGCCG GATCCCGGAG CTGGAGAAGC GGCTTGCGGA CATCGAAGCC
AACGAGAATG CCGGCGAGAT GATGGAGGAG GCGGTCACCG CCGATCACAT CGCCCAGGTG
GTGTCGCGCT GGACCGGCGT GCCGGTCGAC AAGATGCTCG AGGGCGAGAA GGAAAAGCTG
CTGCGGATGG AAGAGCAGAT CGGCAAGCGC GTGGTCGGCC AGTTCGAGGC CGTGCATGCG
GTGTCGACCG CGGTCCGTCG TGCGAGGGCC GGGCTGCAGG ACCCGAACCG GCCGATGGGC
TCGTTCATGT TCTTGGGGCC CACCGGCGTC GGCAAGACCG AGCTGACCAA GGCGCTGGCG
CAATATCTGT TCGACGACGA GACTGCGATG GTCCGGCTCG ACATGTCGGA ATACATGGAG
AAGCACTCGG TCGCCCGGCT GATCGGCGCG CCTCCGGGCT ATGTCGGCTA CGACGAGGGC
GGCGCGCTTA CCGAAGCGGT GCGGCGCCGG CCGTATCAGG TGGTGCTGTT CGACGAGATC
GAGAAGGCGC ATCCGGACGT GTTCAACGTG CTGCTGCAGG TGCTCGACGA CGGCCGCCTG
ACCGACGGGC AGGGCCGCAC CGTCGACTTC CGCAACACGC TGATCGTGAT GACGTCGAAT
CTCGGCTCGG AATATCTGGT CAACCAGCCC GAGGGCGAGG ACACCGGGGT GGTGCGCGAA
CAGGTGATGG ACATGGTGCG GGCGCATTTC CGGCCGGAAT TCCTCAACCG GGTCGACGAG
ATCATCCTGT TCCACCGCCT GCAGAAGAAC GAAATGGGCC GGATCGTCGA CATCCAGTTC
AGCCGGCTGG CGAAGCTGCT GGAGGATCGC AAGATCGTGC TCGATCTCGA CCCCGCCGCG
CGCGACTGGC TCGCCGAGAA GGGCTGGGAC CCCGCCTATG GGGCGCGTCC CCTGAAGCGG
GTGATCCAGC GCCATGTGCA GGACCCGCTC GCCGAGATGA TCCTCGACGG CACCGTCAGC
GACGGCGCGA AGGTGGCGAT CTCGACCGAA GGCGGCGTCC TGACCTTCAA CGGCGCCCCG
CCGCACACCG CCGATGTCGA GCCGTTCCCC GGGCGTCCGC CGAAGCGGAT GCTGAACTGA
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| Protein sequence | MNPEKYTERV RGFVQSAQSL AVREGHQQFS PLHILKVLLD DSEGLAGGLI DRSGGNSRAI
LKATEDALGK MPKVSGSGAG QVYLAPATAR ALDGAEQAAE KAGDSFVTVE RLLLALSLDK
DSEAGQLLAK GGVTPQNLNA AINALRKGRT ADSATAENAY DALKKYARDL TQAARDGKLD
PVIGRDEEIR RTIQVLSRRT KNNPVLIGEP GVGKTAIVEG LALRILNGDV PESLKDKKLL
ALDMGALIAG AKYRGEFEER LKAVLNEVTA AAGGIVLFID EMHTLVGAGK ADGAMDASNL
LKPALARGEL HCIGATTLDE YRKHVEKDAA LARRFQPVFV SEPTVEDTIS ILRGLKDKYE
QHHGVRIADS ALVAATTLSN RYITDRFLPD KAIDLMDEAA ARLKMQVDSK PEELDSMDRE
IVRLKIEQEA LKKESDAGSK SRLVTLEKEL ADLEEKSAAL TQRWSAEKNK LSDAQKLKSE
LDGLRLELAD AQRRGEYQRA GELAYGRIPE LEKRLADIEA NENAGEMMEE AVTADHIAQV
VSRWTGVPVD KMLEGEKEKL LRMEEQIGKR VVGQFEAVHA VSTAVRRARA GLQDPNRPMG
SFMFLGPTGV GKTELTKALA QYLFDDETAM VRLDMSEYME KHSVARLIGA PPGYVGYDEG
GALTEAVRRR PYQVVLFDEI EKAHPDVFNV LLQVLDDGRL TDGQGRTVDF RNTLIVMTSN
LGSEYLVNQP EGEDTGVVRE QVMDMVRAHF RPEFLNRVDE IILFHRLQKN EMGRIVDIQF
SRLAKLLEDR KIVLDLDPAA RDWLAEKGWD PAYGARPLKR VIQRHVQDPL AEMILDGTVS
DGAKVAISTE GGVLTFNGAP PHTADVEPFP GRPPKRMLN
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