| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4242 |
|---|
| Symbol | |
|---|
| ID | 3912050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4819161 |
|---|
| End bp | 4820180 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637886144 |
|---|
| Product | putative phosphate-binding periplasmic protein |
|---|
| Protein accession | YP_487843 |
|---|
| Protein GI | 86751347 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.391821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTCTC TCTTGAGAAT CGACATTATT TCGGTCGCGG TGGCCTGCGT CGCGTTCGCC
GCCGCATCAG TCGGTCCGGC CGAGGCCCGC GATCAGCTAT GGATCGCCGC TTCACCCTCC
GACCAGAGCT TCGCCAAGGC TGTGTCCGTG CAATTCGGCA GAGCCGGCAG GTTCAAGACA
CCCATCGTGA AAGACGGAGG CCCGCCAGCC GGGTTAATGT CGTTCTGCCG CGGCGTCGGC
CCCGACAATT TCGATATCGC TTTCTCCTCG CGCCGGATCG CTTCTTCCGA AGTCGAGCTC
TGCAATAAGA ACGGCGTCAA AGACATTACT CAAGTGCAGT TTGGCTATGA TGCCCTTGTG
TTTGTCACCA ATAAGGCGAG CCAGACCCCG GCCCTCTCGC GCACGGCTGT CTACCTTGCG
ATCGCGCGGG ACGTTCCGGA CAAAGGCACG TTGGCGTCAA ATACGAGCAA GCCGGCCAAT
ACCCTCTACA TTCCGAGCGC TAACCACGGT GCGCGCGACG TGTTCGACGA AATGCTGATG
GTTTCGTCGT GCACGTCCAC CGGGGCCTAC GCGATTATCC AGAAAACCAA TCCAGACAAA
TCCAAAGTAG CGGCGCAATG TCGGGCAGCG CGGCAAGCCG CGAATGTGGT CAATATGGAT
AGCGACAGCG GCACACTCGC TCGTCTTCAA TCCGATCCCA AGGGCGTCGG CGTGGTCACC
TGGTCTTTCT ACACGAACAA CGACGACAAG TTGAAAGTTG TCGCTTTGGA CGGCGTCGTC
CCGTCGAAAG CGACGGTGGC TTCAGGCACA TTCCCGATAG CGTACCCTCT CTATTTGTAT
GTGAAAAAGG CTCAAATCGG CCAGATCCCG GGGATTAAGG AGTGGATCGC CGAATTCACG
AGTGAAAATG CGTTCGGCCC TGACGGCTAT CTTGGGGATA GCGGCCTCGT CTCAATGCCG
GATGCACAGA GGCGACAGTC GCGTGCTGAT GCCCAGGCCC TCGTATCATA TAAACCTTGA
|
|---|
| Protein sequence | MGSLLRIDII SVAVACVAFA AASVGPAEAR DQLWIAASPS DQSFAKAVSV QFGRAGRFKT
PIVKDGGPPA GLMSFCRGVG PDNFDIAFSS RRIASSEVEL CNKNGVKDIT QVQFGYDALV
FVTNKASQTP ALSRTAVYLA IARDVPDKGT LASNTSKPAN TLYIPSANHG ARDVFDEMLM
VSSCTSTGAY AIIQKTNPDK SKVAAQCRAA RQAANVVNMD SDSGTLARLQ SDPKGVGVVT
WSFYTNNDDK LKVVALDGVV PSKATVASGT FPIAYPLYLY VKKAQIGQIP GIKEWIAEFT
SENAFGPDGY LGDSGLVSMP DAQRRQSRAD AQALVSYKP
|
|---|
| |