| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4239 |
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| Symbol | |
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| ID | 3912047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4815208 |
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| End bp | 4817553 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886142 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_487841 |
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| Protein GI | 86751345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.475083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCG CCCGCCGCTG GCCGATCCTG TCATCGCCGC GCTTGCTTCG CAGCGCCACG
GCCCGACTGC TGCTCGGCGC CGCGATCTGC CTCGTCAGTC TGCCGCCCTC GTCGCGACCG
GCCGAAGCCC AGGGCGTTGC GCCCGCGGCC GGCGCCGAGC TGCCGAGCGT CACCGTCGAT
GCGCCCGCCG CCCGGCCGGC GCGTCCGCGA TCGGTGGCGG CGCCGCAGCG AAATCCACAG
GCCGTGGCGC GCCGGCCGAA TCCTCAACGC AATCCCGCGC CGGCGCCGCC GACGCCGTCC
GAACGCGCCG CGGCCGCCGC AGCCGTGCTC AACGAGCAGA AACTCGGCTA CCGGGCGATG
CCGAGCCCGA CGACGCTGCG CACCGGCGCC TCGCCGCTCG AGAGCTCGCA ATCCGTCAAT
GTGGTGCCCG AGCAGGTGTT GAAGGATCAG TTGCCGCGCA ATCTCGACGA CGCGCTCGCC
AACGTCTCCG GCGTCACCCA GACCAACACG CTCGCCGGCT CGTTCGACGC GGTGATCCGG
CGCGGCTTCG GCGACAATCG CGACGGTTCG ATCATGCGCA ACGGCATGCC GCTGGTGCAG
GGCCGCGCCC TCGGCGCGAC CGTCGAGAGC GTCGAGGTGC TGAAGGGCCC GGCGTCGCTG
CTGTACGGCA TCCAGACCCC CGGCGGCATC GTCAACACCA TCAGCCGGCG GCCGGAGCTG
TATCAGCACG GCTCGCTGAC GTTGCTCGGC TCCAGCTTCG GCGGCGGCAA GAACGGCGCC
AATGCGATCT TCGACCTCAC CGGGCCGATC GGCGACACCG GCCTCGCCTA TCGGTTCATC
GGCTCTGGGC TCGACGAGGA TTACTGGCGC AATTTCGGCG CCAATCGCGA GATGCTGCTG
GCGCCGTCGC TGGCCTGGTA TGGCGAGCGC ACCACCGTGC AGTTCAGCTA CGAGCACCGC
GAGTTCAGCT ACCCGTTCGA TCGCGGCACG TCGTTCGTCA ACGGCGCGCC GCTGGCGATC
CCGGCGACGC GACGGCTCGA CGAGGCGTTC AACCGCACCT GGGGCAAGTC GGATCTGGTG
CAGGGCTCGG TCGAGCACCG CCTCGACGAC GTCTGGAAGC TCACCGCCGC CTACAGCTAC
AATTCCGAGA CCTACGACGC CAATCAGCTC CGCATCACCG GCGTCAATGC CGCAACCGGC
GTCGAGACCC GCAGCAATGA CGGCACCAAG GGCGCGCTGG CCTATTCGAG CTACGGCACG
TCATATCTGT CGGGCGAGCT CTGGCTCGGC GGGCTGCGCA ACGACGTGCT GATCGGCGGC
GATGCGCAGC GCCGCGTGAT CTATCGGCAG AACCTGATCC GCCAGTCGAC GCCGAGCTTC
AACTTCTACA ATCCGGTCTA TGGCCTGGTG CAGCCGGGCA CGACCGTCTC GGCGTCCGAC
AGCGACCAGA CCGACAAGCT CGAAACCCGC TCGCTGTTCG TGCAGGACAC GCTGCATCTC
ACCGACTGGT TCTCGCTGGT CGGCGGCCTG CGCTGGATGG AATACGATCA GCTCGCCGGT
CGCGGCCGGC CGTTCACCGC CAACACCGAC CTCGCGGGGT CGAAGGTGCT GCCGCTCGCC
GGCGCGATTT TCAAGCTCAA CCAGCAGGTC TCGCTCTACG CCAGCTACAC CCAGTCGCTG
CAGCCGAGTT CGACCATCGC GCCGCTGACC GGCGGCGTCG TCATCGGCTC CAACATCGCG
CCCGAAGAGG GCACGCAATA TGAAGCCGGC GTCAAATTCG ACCTGAACAA GCGGCTGTCC
GGCACGCTGG CGGTCTACGA CATCGACAAG AAGAACGTGC TGGTGTCGCA GTTCAACGCG
TCGACGGGGC TGAACGAATA TCGCGCCGCC GGCAAGGTGC GCTCGCGCGG CGTCGAATTC
GACGTCACCG GCCGGCTCGA CGATCATTGG AGCACGATCG CCAGCTACGG CTACACCGAC
GCCTATGTGA CCGAAGATCC GACGCTGGTC GGCAAGCGCC TGCAGAACGT CGCGATGAAC
ACCGCGTCGC TGTTCCTGGT GTATGATTTC GGCACCGCGC TGCCCGGGCG GCTCCGGCTC
GGCGGCGGCG CCCGCTATGT CGGCGACCGG CCCGGCGACA GCACCAATTC CTTCGTGCTG
CCGGCCTATA CGGTGGCCGA TGTCTTCGCC AGCTACGAGG TGAAACACGC CGGCATCCCG
GTGATCTATC AGCTCAACGT CAAGAACCTG TTCGATCAGG TGTACTACCC GTCGGCGGTC
AACACCCTGA ACGTCGCCCT CGGCGACGCC CGGCGGTTCT CGCTGTCGGC GACGGCGAAG
TTCTAG
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| Protein sequence | MPTARRWPIL SSPRLLRSAT ARLLLGAAIC LVSLPPSSRP AEAQGVAPAA GAELPSVTVD
APAARPARPR SVAAPQRNPQ AVARRPNPQR NPAPAPPTPS ERAAAAAAVL NEQKLGYRAM
PSPTTLRTGA SPLESSQSVN VVPEQVLKDQ LPRNLDDALA NVSGVTQTNT LAGSFDAVIR
RGFGDNRDGS IMRNGMPLVQ GRALGATVES VEVLKGPASL LYGIQTPGGI VNTISRRPEL
YQHGSLTLLG SSFGGGKNGA NAIFDLTGPI GDTGLAYRFI GSGLDEDYWR NFGANREMLL
APSLAWYGER TTVQFSYEHR EFSYPFDRGT SFVNGAPLAI PATRRLDEAF NRTWGKSDLV
QGSVEHRLDD VWKLTAAYSY NSETYDANQL RITGVNAATG VETRSNDGTK GALAYSSYGT
SYLSGELWLG GLRNDVLIGG DAQRRVIYRQ NLIRQSTPSF NFYNPVYGLV QPGTTVSASD
SDQTDKLETR SLFVQDTLHL TDWFSLVGGL RWMEYDQLAG RGRPFTANTD LAGSKVLPLA
GAIFKLNQQV SLYASYTQSL QPSSTIAPLT GGVVIGSNIA PEEGTQYEAG VKFDLNKRLS
GTLAVYDIDK KNVLVSQFNA STGLNEYRAA GKVRSRGVEF DVTGRLDDHW STIASYGYTD
AYVTEDPTLV GKRLQNVAMN TASLFLVYDF GTALPGRLRL GGGARYVGDR PGDSTNSFVL
PAYTVADVFA SYEVKHAGIP VIYQLNVKNL FDQVYYPSAV NTLNVALGDA RRFSLSATAK
F
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