| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4211 |
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| Symbol | |
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| ID | 3912019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4783668 |
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| End bp | 4785464 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637886114 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_487813 |
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| Protein GI | 86751317 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.64235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAGTT TCGGAAATCG GACTCTCTCC AGCCGCTTGC GGCTGATGAC GATGGCGAGC
GCCGCGGCAT TGGTCGCCGC GTCGATGACG CTGGCGGCGC CGGCATGGGC CGCCGACGAT
GCGGTGCTGA AGAAGTGGAT CGACGAGGAG TTTCAGCCCT CGACGCTGTC GAAGGACGAC
CAGCTCAAGG AACTGCAATG GTTCGCCAAG GCGGCCGAGC CGTTCAAGGG CATGGACATC
AACGTCGTCT CCGAGACCAT CACCACCCAC GAATACGAGG CGAAGACGCT CGCGAAGGCG
TTCTCGGAGA TCACCGGCAT CAAGCTCAAG CATGATCTGA TCCAGGAAGG CGACGTGGTC
GAGAAGCTGC AGACCCAGAT GCAGTCCGGC AAGAACGTCT ATGACGGCTG GATCAACGAC
AGCGACCTGA TCGGCACGCA TTTCCGCTAC GGCCAGACCA TCGCGCTGTC CGACTACATG
ACCGGCGAGG GCAAGGACGT CACCGATCCG ATGCTCGATA TCGATGACTT CATCGGCAAG
TCGTTCACCA CCGCGCCCGA CAAGAAGATG TACCAGTTGC CCGACCAGCA GTTCGCCAAT
CTGTACTGGT TCCGCTACGA CTGGTTCACC AATCCGGACT ACAAGGCGAA GTTCAAGGCG
AAATACGGCT ACGAGCTCGG CGTCCCGGTC AACTGGTCGG CCTACGAGGA TATCGCCGAG
TTCTTCACCA ACGACATCAA GGAGATCAAC GGCGTCAAGG TCTATGGTCA CATGGACTAC
GGCAAGAAGG ATCCCTCGCT CGGCTGGCGC TTCACCGACG CCTGGCTGTC GATGGCCGGC
AACGGCGACA AGGGCTTGCC GAACGGTCTG CCGGTCGACG AATGGGGCAT CCGCATGGAA
GGCTGCCGTC CGGTCGGCTC CTCGATGGAG CGCGGCGGCG ACACCAACGG TCCCGCGGCG
GTGTACTCCA TCGTGAAGTA TCTCGACTGG ATGAAGAAGT ATGCGCCGCC GCAGGCGCAG
GGCATGACCT TCTCGGAGTC GGGGCCGGTG CCGGCGCAGG GCAACGTCGC CCAGCAGATG
TTCTGGTACA CCGCCTTCAC CGCCGACATG GTGAAGCCCG GCCTGCCGGT GGTGAACGCC
GACGGCACGC CGAAATGGCG GATGGCCCCC TCGCCGAAGG GCGCCTATTG GAAAGACGGC
ATGAAGCTCG GCTATCAGGA CGTCGGCTCC GGCACGCTCT TGAAGTCGAC GCCGCCGGAT
CGCCGCAAGG CGGCCTGGCT GTATCTGCAG TTCATCACCT CGAAGACGGT GAGCCTGAAG
AAGAGCCATG TCGGTCTCAC CTTCATCCGC GAGAGCGATA TCTGGGACAA ATCGTTCACC
GAGCGCGCGC CCAAGCTCGG TGGCCTGATC GAGTTCTATC GCTCGCCGGC CCGCGTGCAG
TGGTCGCCGA CCGGCAACAA CATCCCGGAC TATCCGAAGC TGGCGCAATT GTGGTGGCAG
AACATCGGCG ATGCATCGTC CGGTGCGAAG ACGCCGCAGG CCGCCATGGA TTCGCTGGCG
GCCGCGCAGG ACTCGGTGCT CGAGCGGCTC GAGCGGTCGA AGGTGCAGGG TGATTGCGGT
CCGAAGCTGA ACAAGAAAGA GACCGCCGAG TACTGGTACG AGAAGTCCGC CAAGGACGGC
AACATCGCTC CGCAGCGCAA GCTGGCGAAC GAGAAGCCGA AGGGTGAGAC CGTCGATTAC
GACACCCTGA TCAAGTCCTG GCCCGCCTCG CCGCCGAAGC GCGCGGAGGC GAAGTAA
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| Protein sequence | MHSFGNRTLS SRLRLMTMAS AAALVAASMT LAAPAWAADD AVLKKWIDEE FQPSTLSKDD
QLKELQWFAK AAEPFKGMDI NVVSETITTH EYEAKTLAKA FSEITGIKLK HDLIQEGDVV
EKLQTQMQSG KNVYDGWIND SDLIGTHFRY GQTIALSDYM TGEGKDVTDP MLDIDDFIGK
SFTTAPDKKM YQLPDQQFAN LYWFRYDWFT NPDYKAKFKA KYGYELGVPV NWSAYEDIAE
FFTNDIKEIN GVKVYGHMDY GKKDPSLGWR FTDAWLSMAG NGDKGLPNGL PVDEWGIRME
GCRPVGSSME RGGDTNGPAA VYSIVKYLDW MKKYAPPQAQ GMTFSESGPV PAQGNVAQQM
FWYTAFTADM VKPGLPVVNA DGTPKWRMAP SPKGAYWKDG MKLGYQDVGS GTLLKSTPPD
RRKAAWLYLQ FITSKTVSLK KSHVGLTFIR ESDIWDKSFT ERAPKLGGLI EFYRSPARVQ
WSPTGNNIPD YPKLAQLWWQ NIGDASSGAK TPQAAMDSLA AAQDSVLERL ERSKVQGDCG
PKLNKKETAE YWYEKSAKDG NIAPQRKLAN EKPKGETVDY DTLIKSWPAS PPKRAEAK
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