Gene RPB_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4210 
Symbol 
ID3912018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4782242 
End bp4783360 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID637886113 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_487812 
Protein GI86751316 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGA ACGGCAAGAT GACAAATTCC AAACTGTTCG AACCCTATCA GCTCGGCCCG 
ATCACGCTGT CCAACCGCAT CGCGATGGCG CCGCTCACCC GCAATCGCGC GATTCCCGAT
GGGCTCGTCC CCAGTCCGCT GGCGGCGGAA TATTACGGCC AGCGCGCCAG CGCCGGGCTG
TTGATCACCG AAGCGAGTCA GGTCTCGCAG CAGGGCCAGG GCTATCAGGA CACACCCGGC
ATCTATTCCG ACGCGCAGGT CACAGCCTGG AAGAAGGTCA CCGACGAGGT GCACAAGCGC
GGCGGCAAGA TCTTCATTCA ACTCTGGCAC GTCGGCCGCA TCTCGCATGT CGATCTGCAG
CCGAACCACG GCGCCCCGGT GGCGCCGTCA GCCATCAAGG CCGCCACCAA AACCTTCGTC
GGTGGCAAAT TCGCCGATGT CTCCGAGCCG CGCGCGCTCG AGCTCGGCGA AATTCCCGGC
ATCATCGACG ACTTCCGCCA GGGCGCGGCC AATGCGATCA AGGCCGGCTT CGACGGCGTC
GAGATCCACG GCGCCAACGG CTATCTGCTC GACCAGTTCG CCCGCGACAG CAGCAACAAG
CGCACCGATT CTTATGGCGG ATCGATCGAG AACCGCGCCA GGCTGATGCT CGAAGTAGCG
GCGGCCGTCG CCAAGGAGAT CGGGCCGGAG CGCACCGGCA TCCGGATTTC GCCGGTGACG
CCGGCCAATG ATGTGTCGGA CTCCAATCCG CAGGCATTGT TCGACTACAT CGTCGACGAA
CTCGACAAGC TGAAGCTGGT CTATATCCAC GTCATCGAGG GCGCGACCGG CGGCCCGCGC
GACGTCGCGC CGTTCGACTA CGCGTCCCTG CGCAAGCGCT TCAGCGGCGC CTACATCGGC
AACAATGCCT ATGATCTTAC GCTCGCCGAC AAGCAGCTCG ACGCCAATGC GGCCGACCTG
ATCGCCTTCG GCAAGCCGTT CATCTCCAAC CCCGACCTCG TCGAACGCCT GAAGAGCGGC
GCGCCGCTCA ACGAGCCGGA CAAGTCGACG TTCTACGGCG GCGGCGCCAA GGGCTACACC
GACTACCCGA CGCTGGAATC GGCGCAAGCG GCGCAGTAA
 
Protein sequence
MFRNGKMTNS KLFEPYQLGP ITLSNRIAMA PLTRNRAIPD GLVPSPLAAE YYGQRASAGL 
LITEASQVSQ QGQGYQDTPG IYSDAQVTAW KKVTDEVHKR GGKIFIQLWH VGRISHVDLQ
PNHGAPVAPS AIKAATKTFV GGKFADVSEP RALELGEIPG IIDDFRQGAA NAIKAGFDGV
EIHGANGYLL DQFARDSSNK RTDSYGGSIE NRARLMLEVA AAVAKEIGPE RTGIRISPVT
PANDVSDSNP QALFDYIVDE LDKLKLVYIH VIEGATGGPR DVAPFDYASL RKRFSGAYIG
NNAYDLTLAD KQLDANAADL IAFGKPFISN PDLVERLKSG APLNEPDKST FYGGGAKGYT
DYPTLESAQA AQ