| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4203 |
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| Symbol | |
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| ID | 3912011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4774711 |
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| End bp | 4776087 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886106 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_487805 |
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| Protein GI | 86751309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.486659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTG ATGGGGTGGC CATGCGGCGG ATGAACTTGG TGCAACGACT GGCGAGCAAC
TGGCGCGGCG CCGTGTTGGC AGCACTGGCA ACTGCCCTGT CCGCCTCCCC CGCTCTCGCC
CAGCGCGGCG CGTCCTGCCA TGGCGGGCAG AGCTTCGATC AGTTTCTCGC CGGGCTGAAA
CAGCAGGCGG TCGCGGCCGG GGTGTCGCAG CGGGCGATCG CGCAGGCTTC GCCGTATCTC
GTCTACGACC AGGGCATCGT CAATCGCGAC CGCGGGCAGC GGGTGTTCGG GCAGATCTTC
ACGGTGTTCG CCGGGCGGAT GGCGTCGGAG GGCCGGCGCG TCAAGGGCCA GCAGATGATC
AAGCAGCACG CGCAGGCCTT CGCGCGCGCC GAGAAGGAAT ACGGCGTGCC GCCGGCGGTG
ATCGCCGCAT TCTGGGCGCT GGAGAGCGAT TTCGGCGCGG TCCAGGGCAA CCTCTCGACG
CTGCGCTCGC TGGTGTCGCT GGCCTATGAT TGCCGCCGCT CCGAAAAGTT TCAGCAGGAG
ACCATCGCGG CGCTGAAGAT CGTCGACCGC GGCGATCTGG CGCCCGCCGA AATGATCGGC
TCCTGGGCCG GCGAGCTCGG CCAGACGCAG TTTTTGCCGC GGCACTATTA CGACTACGCA
GTCGACTATG ACGGCGACGG CCACCGCGAC ATGCTGCGCA GCCCCGCCGA CGTCATCGGC
TCGACCGCGC ATTACATCGC GGCCGGGCTG AAATGGCGGC GCGGCGAGCC CTGGCTGCAG
GAAGTGCAGG TGCCGGCCAA CCTTCCCTGG GATCAGGCCG ACCTGCTCAT CAAGCATCCG
CGCGCGCAAT GGGCGCAATG GGGCGTGACT TTCGCCGACG GACGGCCGCT GCCGGGCGAC
ACGCTACAGG CGTCGCTACT GCTGCCGATG GGCCGCCACG GCCCGGCGTT TCTGGCCTAC
GCGAATTTCG CCGCCTATAC CGAATGGAAT AATTCGCTGA TCTATTCGAC CACCGCCGGC
TATCTGGCCA CACGGATCGC CGGCGCGCCG CCGATGCGCA AGCCGACCGT GCAGATCGCG
CAATTGTCGT TCAACGAGAT GAAGCAATTG CAACAGTTGC TGACGCGCGC CGGCTTCGAC
GTCGGCAAGA TCGACGGCAT CCTCGGCCAG CAGAGCCGCA GCGCGGTGAA GGCGATGCAG
ATCAAATACG GCCTGCCGGC GGATTCCTGG CCGACCGCCG AACTGCTGAC GAAGATGGGC
GGAACGGTTA CCCCCGCGCC GTCCGCTTCC ACCGAACCGC CGTTCCGGCC GGTCGCGAGA
CCCGACGCAG CGCCGGCCGA ACGGCGCCCC CGCAATCCAC CGGCGCGGCA GCCGTAG
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| Protein sequence | MTFDGVAMRR MNLVQRLASN WRGAVLAALA TALSASPALA QRGASCHGGQ SFDQFLAGLK
QQAVAAGVSQ RAIAQASPYL VYDQGIVNRD RGQRVFGQIF TVFAGRMASE GRRVKGQQMI
KQHAQAFARA EKEYGVPPAV IAAFWALESD FGAVQGNLST LRSLVSLAYD CRRSEKFQQE
TIAALKIVDR GDLAPAEMIG SWAGELGQTQ FLPRHYYDYA VDYDGDGHRD MLRSPADVIG
STAHYIAAGL KWRRGEPWLQ EVQVPANLPW DQADLLIKHP RAQWAQWGVT FADGRPLPGD
TLQASLLLPM GRHGPAFLAY ANFAAYTEWN NSLIYSTTAG YLATRIAGAP PMRKPTVQIA
QLSFNEMKQL QQLLTRAGFD VGKIDGILGQ QSRSAVKAMQ IKYGLPADSW PTAELLTKMG
GTVTPAPSAS TEPPFRPVAR PDAAPAERRP RNPPARQP
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