Gene RPB_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4187 
Symbol 
ID3911995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4760075 
End bp4760770 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID637886091 
Productribonuclease T2 
Protein accessionYP_487790 
Protein GI86751294 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATC CTATCGTTCG CCGGCGGGCA TGGCTCGCCG CTTTGGCCGC TTGCGCTGTC 
GCATGTCTCG GCACCGCAGC GCCTGCCCAG GATCGGCGCC AGAACGCCCC CGGCGAGTTC
GATTTTTACG TGCTGGCGCT GTCGTGGTCG CCGTCTTATT GCGAGCAGGC GTCCGAGCGC
GGCAATGCCG GGCGCTCGCA GCAGATCCAG TGCGGCGGCC GGCCGTTCTC CTTCGTGGTG
CACGGGCTGT GGCCGCAATA CGAGCGCGGC TTTCCGGAAT ATTGCCAGCG CCCGTCGCCG
CGGCTCGACC GGCGGATCAT GAATTCCATG CTCGACCTGA TGCCGGCGCC GGGGCTGATC
TACAACGAAT GGGACAAGCA CGGCACCTGC GCCGGCACAC CGGCGCGCGA TTACTTCGAG
AACATCCGCC GGGCGCGCGC GGCGGTGCGG ATTCCGCCGG ATTTCATCGA CGCCAAGGAA
CCCCGGACAG TGACCCCCGC CGAGGTCGAG GAGGCCTTCA TCAAGGTCAA TCCCGGCTTG
AGCGAGTCGG CGATCGCCGT GATCTGCGAC CGCACCCGGT TGACCGAGGT CCGGATCTGC
ATGAGCAAGG ATCTGCAGTT CCGCGCCTGC GCGGAGGTCG ACCGCCGCGC CTGCCGTCGC
GACCGTCTCG AGGTGCCGCC GGTGCGCGGC GGCTGA
 
Protein sequence
MRNPIVRRRA WLAALAACAV ACLGTAAPAQ DRRQNAPGEF DFYVLALSWS PSYCEQASER 
GNAGRSQQIQ CGGRPFSFVV HGLWPQYERG FPEYCQRPSP RLDRRIMNSM LDLMPAPGLI
YNEWDKHGTC AGTPARDYFE NIRRARAAVR IPPDFIDAKE PRTVTPAEVE EAFIKVNPGL
SESAIAVICD RTRLTEVRIC MSKDLQFRAC AEVDRRACRR DRLEVPPVRG G