| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4179 |
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| Symbol | |
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| ID | 3911987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4751319 |
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| End bp | 4752749 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886083 |
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| Product | peptidase M16-like |
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| Protein accession | YP_487782 |
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| Protein GI | 86751286 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.567421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCC GATCCGATCT CTCCTACCGG GATGATTGCC TCGACATGAC CGTATCCGCC
TCTCGTCCAC GCGCCGCGCT CGCCATCCTC GCGACGGCGC TGATGCTCGC AGGCCCGGCC
GCCGCCCAAA CCGCCCCCGC CAATCCACCC GCGACCTTCA CGCTCGCCAA CGGCCTCGAC
GTTGTGGTGA TTCCGGATCG TCGCACCCCG GTGGTGACGC AGATGATCTG GTACAAGGTC
GGCTCCGCCG ACGAGACGCC GGGCAAATCC GGACTCGCGC ATTTTCTCGA ACATCTGATG
TTCAAGGGCA CAGCCAAGCA TCCGGCCGGC GAGTTCTCGC AGACCGTGCT GAAGGTCGGC
GGCAACGAGA ACGCGTTCAC CTCGCTCGAC TACACCGGCT ACTATCAGCG CGTGCCGCGC
GATCAACTCG ACAAGATGAT GGCGTTCGAG GCCGACCGCA TGACCGGCCT GGTGCTGAAG
GACGAGAACG TGCTGCCGGA GCGCGACGTC GTGCTCGAGG AATACAACAT GCGCGTCGCC
AATAATCCCG ACGCGCGGCT GACCGAACAG ATCATGGCGG CGCTGTATCT CAATCACCCC
TATGGCCGCC CTGTGATCGG CTGGCTGCAG GAGATCCAGA AGCTCGACCG CGAGGACGCG
CTGGCGTTCT ATCGCCGCTT CTACGCGCCC AACAACGCCA CGCTGGTGAT CGCCGGCGAC
GTCGATGCCG AGGCGATCCG GCCGGCGATC GAGCGCACCT ACGGCGCGGT GCCGGCGCAG
CCGGCGATTG CGCCGCAGCG GGTGCGGCCG CAGGAGCCGG CGCCGGCCGG GCCGCGCACC
GTGACGCTGG CCGATCCGCG GGTCGAGCAG CCGAGCGTGC GGCGCTATTA TCTGGTGCCG
TCGGCCCACA CCGCGGCGAA GGGCGACAGC CCCGCGCTCG AAGTGCTGGC GCAATTGCTC
GGCGGCGGCA GCAACTCCTA TCTCTATCGC GCGCTGGTGA TCGACCGGCC GCTCGCGATC
AATGTCGGCG CCAACTATCA GGGCACCGCG CTCGACGACA CCCACTTCAT CGTCGCGGCG
ACACCGAAGC CGGGCGTCGA ATTCTCCGAG ATCGAGAAGG CGATCGACAA TGTGATCGCC
GACATCGTGC GCAATCCTGT TCGGTCCGAG GATCTCGAGC GGGTGAAGAC GCAGCTGATC
GCCCAGTCGA TCTACGCGCA GGACAACCAG ACCACGCTGG CGCGCTGGTA CGGCGCGGCG
CTGACCGCCG GTCTCACCGT GCAGGACATC CAGAGCTGGC CGCAGCGGAT CCGCGCCGTC
ACCTCGGATC AGGTCCGCGC CGTGGCGCAG CAATTCCTCG ACCGCAACCG CTCGGTGACC
GGCTATCTGG TCAAGGGCAC GCTGCCAAAG CCCGAGGAGA AACGCTCGTG A
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| Protein sequence | MPARSDLSYR DDCLDMTVSA SRPRAALAIL ATALMLAGPA AAQTAPANPP ATFTLANGLD
VVVIPDRRTP VVTQMIWYKV GSADETPGKS GLAHFLEHLM FKGTAKHPAG EFSQTVLKVG
GNENAFTSLD YTGYYQRVPR DQLDKMMAFE ADRMTGLVLK DENVLPERDV VLEEYNMRVA
NNPDARLTEQ IMAALYLNHP YGRPVIGWLQ EIQKLDREDA LAFYRRFYAP NNATLVIAGD
VDAEAIRPAI ERTYGAVPAQ PAIAPQRVRP QEPAPAGPRT VTLADPRVEQ PSVRRYYLVP
SAHTAAKGDS PALEVLAQLL GGGSNSYLYR ALVIDRPLAI NVGANYQGTA LDDTHFIVAA
TPKPGVEFSE IEKAIDNVIA DIVRNPVRSE DLERVKTQLI AQSIYAQDNQ TTLARWYGAA
LTAGLTVQDI QSWPQRIRAV TSDQVRAVAQ QFLDRNRSVT GYLVKGTLPK PEEKRS
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