| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4175 |
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| Symbol | |
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| ID | 3911983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4746044 |
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| End bp | 4747159 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637886079 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_487778 |
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| Protein GI | 86751282 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.121006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTCT CGTTCGACAA CAAGGTCGAC GGCTCGGTCT GGCTGAATTT CGACATTCAG
CCGTCGGCGC ATCCAGTGTC GGAGACCGAG CGGACCGCGA AGCTCGCGGA CCCGGGCTTC
GGCCGCGTCT TCACCGACCA CATGGCGATC GTCCGCTACG ATCAGGCCAA GGGCTGGTAC
GGCGCGCGCG TCGAGTCCCG CGCCAATTTC CCGCTCGATC CGGCGACCGC CGTGCTGCAC
TACGCGCAGG AGATCTTCGA GGGGCTGAAG GCCTACAAGC GTGCCGATGG CGGCGTGAAC
CTGTTCCGCC CCGACGCCAA TGCGCGGCGC TTCCGCGATT CCGCCGACCG CATGGCGATG
GCGCAGCTTC CCGAGCCGGT GTTCATCGAG GCGATCGAAC AGCTGGTCCG GATCGACCGC
GCGTGGATCC CGGGCGGCGA CGGCAGCCTG TATCTGCGGC CGTTCATGAT CGCCAGCGAG
GTGTTCCTCG GCGTCAAGCC GTCGGCCGAA TACATCTTCG CGGTGATCGC CTCGCCGGTC
GGCTCCTACT TCAAGGGCGG CCCCGCGCCG GTGTCGATCT GGGTGTCGGA GAACTACACC
CGCGCCGCGA TCGGCGGCAC CGGCAGCGTC AAATGCGGCG GCAACTACGC GGCGTCGCTG
CGCGCCCAGG CCGAGGCGAT CGCGCATGGC TGCGATCAGG TGGTGTTCCT CGACGCGATC
GAGCGCCGCT ATATCGAGGA ACTCGGCGGC ATGAACGTGT TCTTCGTGTT CGACGACGGC
TCGCTGTCGA CGCCGCCGCT CGGCACCATC CTGCCCGGCA TCACCCGCGA TTCGATCATC
GCGCTGGCGC GGCAGGCCGG CCGCACCGTG CGCGAGGAAG CCTACACGAT CGAGCAATGG
CGCGCCGATG CGGCCAGCGG CAAGCTGAAA GAGGCGTTCG CCTGCGGCAC CGCGGCGGTG
ATCTCGCCGA TCGGCACCGT GCGCTCGGCG AGCGGCGACT TCACCATCAA CGGCGGCGTC
GCCGGCGAGG TGGCGATGGG CCTGCGCAAG CAGCTCGTCG ACATCCAATA CGGCCGCGCC
GAGGACAAGC ACGGCTGGAT CAGGGACGTG GCGTAA
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| Protein sequence | MGLSFDNKVD GSVWLNFDIQ PSAHPVSETE RTAKLADPGF GRVFTDHMAI VRYDQAKGWY
GARVESRANF PLDPATAVLH YAQEIFEGLK AYKRADGGVN LFRPDANARR FRDSADRMAM
AQLPEPVFIE AIEQLVRIDR AWIPGGDGSL YLRPFMIASE VFLGVKPSAE YIFAVIASPV
GSYFKGGPAP VSIWVSENYT RAAIGGTGSV KCGGNYAASL RAQAEAIAHG CDQVVFLDAI
ERRYIEELGG MNVFFVFDDG SLSTPPLGTI LPGITRDSII ALARQAGRTV REEAYTIEQW
RADAASGKLK EAFACGTAAV ISPIGTVRSA SGDFTINGGV AGEVAMGLRK QLVDIQYGRA
EDKHGWIRDV A
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