Gene RPB_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4174 
Symbol 
ID3911982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4745203 
End bp4745763 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID637886078 
ProductMarR family transcriptional regulator 
Protein accessionYP_487777 
Protein GI86751281 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.482122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.818554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA TAAATTTCAA CGACGACCTG CACGGCGACG GCGCGGCGAT CGCGCTGCCG 
CGCCCGGCGG ATTCGTCGGT CGCGGCGCCG CGCTGGGACA TCATCGAGCT GCTGTTCTTC
GCCTATCGCG ACTTCGTCGG CGATGCCGAC CACGTGCTGG AGGCATTCGG GTTCGGCCGC
GCGCATCACC GGGTGGTGCA TTTCGTCTGC CGCTATCCCG GGCTGACGGT CGCGGATCTG
CTCGACGTGC TGCGCATCAC CAAGCAGTCG CTGGGGCGAG TGCTGAAGCA ATTGCTCGAC
GAGGGCTATA TCGTGCAGAA GGCCGGCGAC AACGACCGCC GTCAGCGCCT TCTTTTCGCC
ACCGCAAAGG GCGAGGCGCT GGTGGTGAAA CTCGCCGGCC TGCAGACCGA CCGGATTGCA
CGCGCGCTGC GCGGCTTCAG CCCGGGCGAA GCCGAGGCCG TGCGCAAGTT CCTGCGCGCC
ATGATCGATT GCGATGATCC GGACAAGGTG CTCCAGACCA TTCTGCAGTC AGACGGCGCC
GTCGCGAAGG ATGTCACGTG A
 
Protein sequence
MADINFNDDL HGDGAAIALP RPADSSVAAP RWDIIELLFF AYRDFVGDAD HVLEAFGFGR 
AHHRVVHFVC RYPGLTVADL LDVLRITKQS LGRVLKQLLD EGYIVQKAGD NDRRQRLLFA
TAKGEALVVK LAGLQTDRIA RALRGFSPGE AEAVRKFLRA MIDCDDPDKV LQTILQSDGA
VAKDVT