Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4172 |
Symbol | |
ID | 3911980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4743086 |
End bp | 4744474 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886076 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_487775 |
Protein GI | 86751279 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.583754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC TCGCCACCGG CCTGACGCTG ATCCGCTCCG CCAGGCGGCG GGTGTCGGCC GCCAATGGCT GGATGGGGCA GCGCTTCAAC GACTTCATGC CGAAGGGGCT GTACGCCCGC GCGCTGTTGA TCATGATCGT GCCGATGGTG CTGCTGCAAT CGGTGATCGC CTTCGTGTTC ATGGAGCGGC ACTGGAACAC GGTGACGCAG CGGCTGTCGG CGGCGGTGGT GCAGGACATC GCGGCGCTGA TCGACGTCTA CAAGAGCTAC CCGCAGGACA AGGACAACGC CGCGCTGCGC CGGATCGCGC AGAACCGGCT CGGTCTGGTG GTGGATTTCC TCGGCCCGAA CGAGATGCCG CCGCCGGGCA GCAAGCCGTT CTTCTCGCTG CTCGATCAGT CGATCAGCAA GCAGATCAGC AAGCAGATCG CGCGGCCGTT CTGGATCGAC ACCGTCGGCC GCTCCAATCT GGTCGAAATC CGCATCCAGC TCGACGATGC GGTGATGCGG GTGTTCGCGC TGCGCAGCGC CGCCTACGCG TCGAATTCGG AAATCTTCCT GTTGTGGATG GTCGGCACCT CGGCGGTGCT GCTGGTCGTC GCGGTGCTGT TCCTGCGCAA CCAGATCCGG CCGATTCTGC GGCTCGCCGA CGCCGCCGAG AGCTTCGGCA AGGGCCGCGA CGCGCCGAAC TTCAAGCCGC GTGGCGCCCG CGAGGTGCGG CGGGCGGCCT ACGCCTTCAT CGAGATGAAG ACCCGCGTCG AGCGCTCGAT CGAGCAGCGC ACCGCGATGC TGGCCGGCGT GTCTCACGAT CTGCGCACCA TCCTGACCCG GTTCAAGCTC GAACTCGAAC TGATCGGCGA CGCGCCGGAG ACCGACGGCA TGCGCAAGGA CGTCGACGAG ATGTCGGCGA TGCTCGAGGC CTATCTCGCC TTCGCCCGTG GCGACAGCGG CGAGCGGGCG CAGCCGACCG ACATGGCGGC GGCGCTCGAG GAACTACGCA GCGACGCCGA GCGTCACGGC CACCGCGCCA CTGTGGCGTT CTCCGGCCAG CCGGTGGTGA CGGTCAAGCC GGCGTCGTTC AAGCGCTGCC TCGCCAATCT GGTGTCGAAC GCGGCGCGCC ACGCCGACGC CATCGCCATC ACCGGCCAGC GCGATCACCG CTATCTCACG GTGATGATCG ACGACGACGG TCCCGGCATT CCGATGGCGA TGCGCGAGGA AGTGTTCAAG CCGTTCTTGC GGCTCGACGA CGCCCGCAAC CAGGACGAAG GCGGCACCGG CCTCGGCCTT GCGATCGCCC GCGACATCGC CCGCTCGCAT GGCGGCGACA TCACGCTGGG CGACAGCCCG ATGGGCGGCT TGCGCGCGAC GGTGCGGGTG CCGGTGTAG
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Protein sequence | MSTLATGLTL IRSARRRVSA ANGWMGQRFN DFMPKGLYAR ALLIMIVPMV LLQSVIAFVF MERHWNTVTQ RLSAAVVQDI AALIDVYKSY PQDKDNAALR RIAQNRLGLV VDFLGPNEMP PPGSKPFFSL LDQSISKQIS KQIARPFWID TVGRSNLVEI RIQLDDAVMR VFALRSAAYA SNSEIFLLWM VGTSAVLLVV AVLFLRNQIR PILRLADAAE SFGKGRDAPN FKPRGAREVR RAAYAFIEMK TRVERSIEQR TAMLAGVSHD LRTILTRFKL ELELIGDAPE TDGMRKDVDE MSAMLEAYLA FARGDSGERA QPTDMAAALE ELRSDAERHG HRATVAFSGQ PVVTVKPASF KRCLANLVSN AARHADAIAI TGQRDHRYLT VMIDDDGPGI PMAMREEVFK PFLRLDDARN QDEGGTGLGL AIARDIARSH GGDITLGDSP MGGLRATVRV PV
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