| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4161 |
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| Symbol | |
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| ID | 3911969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4733315 |
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| End bp | 4734037 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637886065 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_487764 |
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| Protein GI | 86751268 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.118925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCG TCATGGAATT CAAGGCGACC GCACGTCCGA AGAGCGGCAA GGGGGCCGCC
CGGGCAGAGC GTCGCGCCGG CCGAGTGCCC GGAGTGATCT ACGGAGACAA CAAGCCCCCG
CTGCCGATCT CGGTCGAGGA CAAGGACCTG CGCCTGCGCA TTCAGGCCGG CCGCTTCCTC
ACCACGATCT TCGACGTCGT CCTCGACGGC CAGAAGCACC GGGTGATCCC GCGCGACTAT
CATCTCGACC CGGTCAAGGA TTTCCCGGTC CATGTCGACT TCCTGCGGCT CGGCGAAGGT
GCGACCATCC GCATCAGCGT GCCGCTGCAT CTGAAGGGCC TCGAATCCGC CCCGGGCGTG
AAGCGCGGCG GCACCTTCAA CATCGTCACC CACACCGTCG ACCTCGAGGC TCCGGCCGAC
GCGATCCCGC AGTTCATCGA GGCCGACGTC TCGACGCTGG ATATCGGCGT GTCGCTGCAT
CTGTCGGACA TCGCGCTGCC CAAGGGCGTC AAGTCGGTGT CGCGCGAGGA CGTCACGCTG
GTCACCATCG TGCCGCCGTC GGGCTTCAAC GAAGAAGCTG CTGCGCCCGG CGCGGCGCCT
GCGGCTGCGG CCGCGGCTCC TGCCGCCAAG GCTGGTGCCG CCAAGGCTCC GGCGGCTGCG
GCTCCCGCCG CCAAGGCCGG CGCGGCCAAG GCTCCGGCGG CTCCGGCGGC CAAGAAGAAG
TAA
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| Protein sequence | MATVMEFKAT ARPKSGKGAA RAERRAGRVP GVIYGDNKPP LPISVEDKDL RLRIQAGRFL
TTIFDVVLDG QKHRVIPRDY HLDPVKDFPV HVDFLRLGEG ATIRISVPLH LKGLESAPGV
KRGGTFNIVT HTVDLEAPAD AIPQFIEADV STLDIGVSLH LSDIALPKGV KSVSREDVTL
VTIVPPSGFN EEAAAPGAAP AAAAAAPAAK AGAAKAPAAA APAAKAGAAK APAAPAAKKK
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