Gene RPB_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4141 
Symbol 
ID3911949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4715664 
End bp4716365 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID637886045 
ProductAlpha/beta hydrolase protein 
Protein accessionYP_487744 
Protein GI86751248 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTT CGTTGCCGAT CCTGTTGATC CCGGGGCTGG GCGGCTCGCC GCGGATCTAC 
GCCCCGGTGC TGCCGTCGCT GTGGACATTC GGCCCGGTGA CGGTCGCCAA CCACATTCGC
GATGACAGCA TGGCGGCGAT CGCCGGGCGA ATTCTGGCCG AAGCTCCGCC GCGCTTCGCG
CTCGCCGGAC ATTCGATGGG CGGCTACATC GCCTTCGAGA TCCTGCGCCA GGCGCCCGAG
CGGGTGGCGA GGCTGGCGCT GATCAATACC CAGGCGCGTC CGGACAGCGA CGAGGCCAAG
GAGCGCCGCA CCCGGCAGAT CGCGCAGGCC GAAGCCGGCC AGCTTCATGC GGTGCTCGAC
GTCCTTTATC CTGGCTTCGT GCATCCGTCG CGCTGTGAAG ACGCCAGGCT GCAGCGCGTC
ATCCACGACA TGGGCGACGA TGTCGGTGCA GACGGCTTCG TCCGCCAGCA GCGCGCGATC
ATCGCCCGCG CCGACTCCCG GCCGACGTTG GCGACCATCC GCTGCCCGAC GCTGGTGATC
TCCGGCGACA CCGACAACAC CATTCCCAAC AGCCTGTCGC AGGAGATGGC CGAGGGCATC
GCCGGCGCCA AGCTGGAGAT CATCCCGGAC TGCGGCCACC TCCCGCAGAT CGAGCAGCCG
CAGGCGACCG CGGCGGCGCT GGCCGGCTGG CTGCGGAACT GA
 
Protein sequence
MDTSLPILLI PGLGGSPRIY APVLPSLWTF GPVTVANHIR DDSMAAIAGR ILAEAPPRFA 
LAGHSMGGYI AFEILRQAPE RVARLALINT QARPDSDEAK ERRTRQIAQA EAGQLHAVLD
VLYPGFVHPS RCEDARLQRV IHDMGDDVGA DGFVRQQRAI IARADSRPTL ATIRCPTLVI
SGDTDNTIPN SLSQEMAEGI AGAKLEIIPD CGHLPQIEQP QATAAALAGW LRN