Gene RPB_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4135 
Symbol 
ID3911943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4709513 
End bp4710427 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID637886039 
Producttransglutaminase-like 
Protein accessionYP_487738 
Protein GI86751242 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTGC TGACCATCAC TCACCGCACC GAATATCACT ATGCCCATCC GGTCGGCTTC 
GGCGAACACC GGGTGATGCT GCGGCCGCGC GATGGCCACG ACCTGCGGAT GCTGCAGGGC
GCGCTGCTGA TCACGCCGCA GCCGGCGTCG CTGCGCTGGA TCCACGACGT GTTCGGCAAC
AGCGTCGCAA TCGCGACCTT CGACCAGCGC GCGACCACGC TGACGTTCGA TTCCACCGCC
ACCGTCGAGC ACCATCCCAG CGATGAATTC GCATTGACCC CTGAAGATCG CGCGTTCTTC
TACCCGTTCC TGTACGACGA GGAGGAATTT CCCGATCTCG AACCGTTCAT TCGTCCGCAA
TACGGCGATC CGGACGGAGA GCTCTCGGCC TGGGCGCTCA GCTTTCTCGA TGCCCAGGGC
TCGACCCCGA CCTTCAAGAT TCTGAGCGGC CTCACCCACG GCATCCGCGG CGCGTTCAGC
TATCGCAAGC GCCATGCCCA CGGCACCCAG CATCCGCTCG ACACGTTGCA GACCGGCTCC
GGCACCTGCC GCGATTTCGC GCTGCTGATG ATCGAGGCGC TGCGCCGGCT CGGCATCGCC
GCGCGTTTCG TCTCCGGCTA TCTGTTCGTG CATGGCGACC GCGCGCACGG CTATGTCGGC
GGCGGCTCGA CCCACGCCTG GGTGCAGGTC TATCTGCCGA GCGCCGGCTG GATCGAGTTC
GATCCGACCA ACGGCATCAT CGGCAGTCGC GATCTGGTGC GGGTGGCGGT GGCGCGCGAT
CCGATTCAGG CGGTGCCGCT GCACGGCAGC TATTTCGGCG GCGCCGACGC ATTCCTGCGG
ATGGACGTCA GCATCAACGT CGTCTCGGCC GGCGACGATA CGCCCCACGA CGCGACTGCC
GCGGCGCATG GCTGA
 
Protein sequence
MPLLTITHRT EYHYAHPVGF GEHRVMLRPR DGHDLRMLQG ALLITPQPAS LRWIHDVFGN 
SVAIATFDQR ATTLTFDSTA TVEHHPSDEF ALTPEDRAFF YPFLYDEEEF PDLEPFIRPQ
YGDPDGELSA WALSFLDAQG STPTFKILSG LTHGIRGAFS YRKRHAHGTQ HPLDTLQTGS
GTCRDFALLM IEALRRLGIA ARFVSGYLFV HGDRAHGYVG GGSTHAWVQV YLPSAGWIEF
DPTNGIIGSR DLVRVAVARD PIQAVPLHGS YFGGADAFLR MDVSINVVSA GDDTPHDATA
AAHG