Gene RPB_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4123 
Symbol 
ID3911931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4694468 
End bp4695595 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID637886027 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_487726 
Protein GI86751230 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.643015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCTG CCGTCATTGC CGCGACCGGC CTCTACACCC CGCCCGACAG TATTTCGAAT 
GTCGAGCTGG TGCAGGCGTT CAACACCTAT GTGGCGAACT TCAACGCAGC CAACCAGGCG
GCGATCGCCG CCGGGCAGAT CGAGCCGCTG CTGCCGTCGT CGCCGGAATT CATCGAGAAG
GCGTCCGGCA TCAAGTCGCG CTACGTGGTG GCGAAAGCCG GCATCCTCGA TCCGGAGCTG
ATGCGGCCGG TGATCCCGGA GCGGCCGAAC GAACAGGTCT CGGTGCTGGC CGAGATCGCC
GTGAAGGCCG CCGACGAGGC GCTGGCGCGC TGGGGCAAGC CGCGCGAGCG GATCGGCGCG
GTGCTGTGCG CCTGCTCCAA CATGCAGCGC GCCTACCCCG CAATGGCGGT CGAGGTGCAG
GACGCGCTCG GCCTCGGCGG CTTCGCCTTC GACATGAACG TGGCCTGCTC GTCCGCGACC
TTCGGCATCA AGACCGCGGC GGATTTCGTC GCCACCGGCT CGGCCGACGC GGTGCTGATG
GTCAATCCCG AGATCTGCTC CGGGCATCTC AATTTCCGCG ACCGCGACAG TCACTTCATT
TTCGGCGACG TCGCCACCGC GGTGATCGTC GAGCGCGCCG ACGAAGCGCA AGATGGTGAA
CGGGCCGGCT GGGCGATCCT CGGCACAAGG CTGAAGACGC AGTTCTCCAA CAACATCCGC
AACAATTCCG GATTCCTCAA CCGCGCCTGG CCGGAAGGCC GCGACCTCAC CGACAAGCTG
TTCGTGCAGC AGGGCCGCAA GGTGTTCAAG GAAGTGGTGC CGATGGTCTC CGACATGATC
ATCGACCACG CCGCCGAACT CGGCATCGAT CCGCACGCGC TGAAGCGGAT GTGGCTGCAC
CAAGCCAACA TCAACATGAA CGAGATCATC GGCCGCAAGG TGCTGGGCCG CGATCCGACG
CGCGAAGAGA ACGTCATCAT CCTCGACAGC TACGCCAACA CCTCGTCGGC CGGCTCGATC
ATCGCCTTCC ACACCGCCTC GGACGATCTG GCGCAAGGCG ACCTCGGCCT GATCTGCTCG
TTCGGCGCCG GATATTCGGC CGGCACGGTG TTCGTGCAGA AGCGCTGA
 
Protein sequence
MRPAVIAATG LYTPPDSISN VELVQAFNTY VANFNAANQA AIAAGQIEPL LPSSPEFIEK 
ASGIKSRYVV AKAGILDPEL MRPVIPERPN EQVSVLAEIA VKAADEALAR WGKPRERIGA
VLCACSNMQR AYPAMAVEVQ DALGLGGFAF DMNVACSSAT FGIKTAADFV ATGSADAVLM
VNPEICSGHL NFRDRDSHFI FGDVATAVIV ERADEAQDGE RAGWAILGTR LKTQFSNNIR
NNSGFLNRAW PEGRDLTDKL FVQQGRKVFK EVVPMVSDMI IDHAAELGID PHALKRMWLH
QANINMNEII GRKVLGRDPT REENVIILDS YANTSSAGSI IAFHTASDDL AQGDLGLICS
FGAGYSAGTV FVQKR