| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4119 |
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| Symbol | |
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| ID | 3911927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4690935 |
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| End bp | 4691753 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886023 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_487722 |
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| Protein GI | 86751226 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGC TGCGTCTTGC CCTTCTGAGC TGCGCCATTG GCTGCGCGCT CCTCGCCGCC
GCACCGGCCC AGGCCGCGCG CTGCGGTGGC GATTTCAACG CCTTCATCGC CAGCATGTCG
GCCGAGGCGG CGCAGGCGGG AGTTTCGCGC GATGTGATTT CCGAGGCGCT GGGCGGCGTC
ACCCCGGACC CCGCGGTGCT GGCGTTCGAT CGCCGCCAGC GCGGCACCTT CAACAAGACC
TTCGAGCAAT ACGTCGCGAC CCGCGTCGGC GCCGGCCGGA TCAAGTCGGG GCGGGCGATG
CTGCAGCGGC ACGCCTCGCT GCTGTCCCGG ATCGAGCGCC AGTTCGGCGT GCCGCCGCAG
ATCCTGGTGG CGATCTGGGG GCTGGAGTCG GATTTCGGCA AGGGCGACAT CGGCAAGCTG
CCGGTGTTCC GGGTGCTGGC GACGATGGCG CATGATTGCC GTCGCACCGA GCTGTTTCAG
GGCGAATTGC TGGCGGCGCT GAAGATCGTG CAGCGCGGCG ATCTGACGAT GCGCGACATG
GTCGGCGCCT ATGCGGGCGA GCTCGGCCAG ACGCAATTTT TGCCGTCGTC CTACATCAAA
TACGGCGTCG ATTTCGACGG CAACGGCCAT GTCGATCTGC GCCACAGCGT GCCCGACGTG
CTGGCCTCGA CTGCCAACCT GCTGAAGACA GCGGGCTGGC GCGCCGGCGG CTCCTACGAA
GAAGGCACGC CGAATTTCGA GGCGATGCGC GAATGGAATC GCGCGCTGGT GTATCGCAAG
ACCATCGCGT ATTTCGCCGA TCAGCTGATC GGGCAGTAA
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| Protein sequence | MSKLRLALLS CAIGCALLAA APAQAARCGG DFNAFIASMS AEAAQAGVSR DVISEALGGV
TPDPAVLAFD RRQRGTFNKT FEQYVATRVG AGRIKSGRAM LQRHASLLSR IERQFGVPPQ
ILVAIWGLES DFGKGDIGKL PVFRVLATMA HDCRRTELFQ GELLAALKIV QRGDLTMRDM
VGAYAGELGQ TQFLPSSYIK YGVDFDGNGH VDLRHSVPDV LASTANLLKT AGWRAGGSYE
EGTPNFEAMR EWNRALVYRK TIAYFADQLI GQ
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