| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4116 |
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| Symbol | mnmA |
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| ID | 3911924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4687068 |
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| End bp | 4688276 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637886020 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_487719 |
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| Protein GI | 86751223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.72585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA CCATGCTCAA CAGCTTGGAT CTGGCGGGAC GCCCGCAGGA CACCCGCGTC
GTGGTGGCGA TGTCGGGCGG CGTCGATTCC TCGGCGACCG CCGCGCTGCT GAAGTCGCAG
GGCTACGACG TCGTCGGCAT CACGCTGCAG CTCTACGATC ACGGCGCCGC CACCCATCGC
AAGGGCGCCT GCTGCGCCGG CCAGGACATC CACGACGCCC GCGACGTCGC CGAGCGGATC
GGGATTCCGC ATTACGTGCT CGACTATGAA AGCCGCTTCC GCGAGTCGGT GATCGATAGC
TTCGCCGACA GCTACGCGCT CGGCGAAACC CCGGTGCCGT GCATCGAGTG CAACCGTTCG
GTCAAGTTCC GCGACCTGCT GGCCACCGCG CGCGAGCTCG GGGCCTCGGC GCTCGCCACC
GGCCACTACG TCTCGTCGCG CCGTCTCGCC GACGGATCGC GCGCGCTGAT CTGCGCCGCC
GATCGCGACC GCGATCAGAG TTACTTCCTG TTCGCGACGA CCCGCGAGCA GCTCGATTTC
CTGCGCTTCC CGCTCGGCGA CATGACCAAG CCGCAGACCC GCGATCTGGC GCGGCAGTTC
GGCCTCTCGG TCGCCGACAA GCACGACAGC CAGGACATCT GCTTCGTGCC GACCGGCCGC
TATACCGACG TGGTCGAGCG GCTGAAGCCG AACGCGATGG AGCCCGGCGA GATCGTCGAT
CTCAACGGCC GTGTGCTCGG CAGCCACCCG GGCATCGTGC ATTTCACCGT CGGCCAGCGC
CGCGGCCTCG GCATCGCCTC GCGGGCGCCG CTGTATGTGC TGCGGCTCGA CGCGGCGCGT
CGGCGTGTGG TGGTCGGTCC GCGCGAGGCG CTGCGGATGG AGCGCATCGT GCTGCGCGAC
GTCAACTGGA TCGGCGACGG TGCGCTCGAT CGGGCGGTCG GCGACGGGCT GGAATTGTTC
GTGCGGGTGC GCTCGACCCG CGCGCCGCAG CCGGCATGGC TGCGCGCCGT CAAGGGCGGC
TACGAGGTCG AACTGGTCGC CGGCGAAGAG GGCGTGTCGC CCGGCCAGGC CTGCGTGTTC
TACGACGCGG CGGAAGGCCA GGCCCGCGTG CTCGGCGGCG GCTTCATCAA GAGCGCCGCG
CCGCGATCGA TCGCGGAGCC GGCGCACGAC GACGCGGCAT CGCCGGCGCT GGCCGCGATG
CGCGGATAG
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| Protein sequence | MTDTMLNSLD LAGRPQDTRV VVAMSGGVDS SATAALLKSQ GYDVVGITLQ LYDHGAATHR
KGACCAGQDI HDARDVAERI GIPHYVLDYE SRFRESVIDS FADSYALGET PVPCIECNRS
VKFRDLLATA RELGASALAT GHYVSSRRLA DGSRALICAA DRDRDQSYFL FATTREQLDF
LRFPLGDMTK PQTRDLARQF GLSVADKHDS QDICFVPTGR YTDVVERLKP NAMEPGEIVD
LNGRVLGSHP GIVHFTVGQR RGLGIASRAP LYVLRLDAAR RRVVVGPREA LRMERIVLRD
VNWIGDGALD RAVGDGLELF VRVRSTRAPQ PAWLRAVKGG YEVELVAGEE GVSPGQACVF
YDAAEGQARV LGGGFIKSAA PRSIAEPAHD DAASPALAAM RG
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