| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4093 |
|---|
| Symbol | phnK |
|---|
| ID | 3911900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4663297 |
|---|
| End bp | 4664097 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885997 |
|---|
| Product | phosphonate C-P lyase system protein PhnK |
|---|
| Protein accession | YP_487697 |
|---|
| Protein GI | 86751201 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0806703 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATC GCACCTCATC CTCTCGGTTC AATGAACCGC TGCTGATCGC CGAAGGCCTG
GCCAAATCCT ACGGCCGACT GCAGGCGTGC CGCGATGTCT CGTTCACGCT GTATCCGGGC
GAAGTGCTGG CGATCGTCGG CGAGAGCGGC TCCGGAAAGT CGACGCTGCT GCAGATGCTG
TCGGCGCAAC TGCCGCCGAG CGCCGGCCGG GTCTCGTACC GGATGCGCGA CGGCGTGCTG
CGTGATCTCG CGGCGCTCGG CGAAGCGGAG CGGCGGTTCC TGTTCCGCAC CGATTGGGGC
TATGTGCACC AGGATCCGGC GCAGGGCCTT CGCATGGCGG TGTCGGCCGG CGCCAATGTC
GGCGAGCGGC TGATGGCGGT CGGCTGGAAT CACTACGGCC GGATCCGCGA CACCGCATCG
TCCTGGCTGT CGCGCGTCGA GATCGGCCTG GACCGCATCG ACGACGCGCC GCGGACTTAC
TCGGGCGGGA TGCGGCAGCG GCTGCAGATC GCGCGCAATC TGGTGACCGA GCCGCGGCTG
ATGTTCATGG ACGAGCCGAC CGGCGGCCTC GACGTCTCGG TGCAGGCGCG GCTGCTCGAT
CTGTTGCGCG GCCTCGTCAC CGACCTCGGG CTTGCGGCCA TCGTCGTCAC GCATGATCTC
GCGGTCGCGC GCCTGTTGTC ACATCGGGTG ATGGTGATGC AGGGTGGCCG CGTGATCGAA
ACCGGCCTCA CCGACCAGGT GCTCGACGAC CCGCACGAGC CCTACACCCA GCTTCTCGTC
GCCTCGATCC TGCCGCCATG A
|
|---|
| Protein sequence | MPDRTSSSRF NEPLLIAEGL AKSYGRLQAC RDVSFTLYPG EVLAIVGESG SGKSTLLQML
SAQLPPSAGR VSYRMRDGVL RDLAALGEAE RRFLFRTDWG YVHQDPAQGL RMAVSAGANV
GERLMAVGWN HYGRIRDTAS SWLSRVEIGL DRIDDAPRTY SGGMRQRLQI ARNLVTEPRL
MFMDEPTGGL DVSVQARLLD LLRGLVTDLG LAAIVVTHDL AVARLLSHRV MVMQGGRVIE
TGLTDQVLDD PHEPYTQLLV ASILPP
|
|---|
| |