Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4080 |
Symbol | |
ID | 3911887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4651251 |
End bp | 4652807 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637885984 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_487684 |
Protein GI | 86751188 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.656205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.161644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCA CCCACGGCCT GCGGCGCGCG CTGCAGATCA ACGCCGACGG CCTCGCCACC GTGTTCAACG GCCGCCGCCG CAGCTGGCGC GACGTCGGCG AGCGCGTCGC CCGCCTCGCC GCCGGCCTGC GTGCGCTCGG CGTCGGCGAA GGCGAGCGCG TCGCCGTGCT GTCGATGAAT TCCGACCGCT ATCTGGAGCT GTATCTGGCC GCCGGCTGGT GCGGCGGCGT GATCGTGCCG CTCAACATCC GCTGGAGCGC ACTGGAGAAC GAGGACGCGC TGCGCGACTG CCGTGCGGTG GCTCTGGTCG TCGACAAGGC GTTCGCCGCG ACAGGCGCGA CGCTGGCGCA AGCGATTCCA GGTCTGGCAA TGGTCTTTGC CGACGATGGC GATGTGCCGG CAGGCATGAA GAGCTACGAA GACGTCATCG CGACCAACGC GCCGATCCCC GACGCGATGC GCAAGGCCGA GGACCTCGCC GGTATTTTCT ATACCGGCGG CACCACCGGG CGTTCCAAGG GCGTGATGCT GAGCCACGGC AACCTGATGG CCAACGCGCT CAATGCTTTG GGCGAAGGTC TGTTTCCCAG CACCTCGGTG TATCTGCACG CGGCGCCGAT GTTCCATCTC GCCAACGGGG CGGCGATGTA TTCGCTGCTG CTGTCCGGCG GCTCCAATGT CATGGTGCCG TCGTTCACGC CGGAAGGCGT GATGGCGGCG ATGCAGAACG ACCGCGTCAC CGATGTGCTG CTGGTGCCGA CCATGATCCA GATGTTCGTC GATCATCCGG CGCTGAAGAG CTACGACCTG TCGTCGCTGA AGAACATCAT CTACGGCGCC TCCCCGATCA GCGAGGCGGT GCTCGCCCGC GCCAGCGCCG CGCTGCCCCA CGTGCAGTTC ACCCAGGCCT ACGGCATGAC CGAATTGTCG CCGATCGCCA CGCTGCTGCA CTGGAAGGAG CATATCGGCG ACGGCAAGGC CAAGGGACGG CAGCGCGCGG CCGGCCGCGC TACGCTCGGC TGCGAGGTCC GCATCGTCGA CGCCGACGAC CAGCCGGTGC CGTACGGCAC CGTCGGCGAG ATCTGCGTGC GCGGCGACAA TGTGATGATG GGCTATTGGG AGCGTCCGGA GGAGACCGCG CGGGCGCTGG CGGGCGGCTG GATGCACACC GGCGACGGCG GCTACATGGA CGAGCACGGC TTCGTCTACG TCGTCGACCG CGTCAAGGAC ATGATCATCT CCGGCGGCGA GAACGTCTAT TCGGTCGAGG TCGAGAACGC GGTGGCGCAG CATCCGGCCG TGGCGCAATG CGCGGTGATC GGGATTCCGC ACGAGGCCTG GGGCGAGCAG GTCCACGCCG TGGTCGTCAC CAAGGCCGGC GCGAGCGTCA CCGCCGACGA ACTGATCGCG CATTGCAAGG CGCTGATCGC CGGCTACAAA TGCCCGCGCA GCGTCGACAT CACCGAGACG CCGCTGCCGC TGTCGGGCGC CGGCAAGATC CTCAAGCGCG AATTGCGACA GCCCTATTGG GAGAACCGCG AACGCCGCGT GAGCTGA
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Protein sequence | MNITHGLRRA LQINADGLAT VFNGRRRSWR DVGERVARLA AGLRALGVGE GERVAVLSMN SDRYLELYLA AGWCGGVIVP LNIRWSALEN EDALRDCRAV ALVVDKAFAA TGATLAQAIP GLAMVFADDG DVPAGMKSYE DVIATNAPIP DAMRKAEDLA GIFYTGGTTG RSKGVMLSHG NLMANALNAL GEGLFPSTSV YLHAAPMFHL ANGAAMYSLL LSGGSNVMVP SFTPEGVMAA MQNDRVTDVL LVPTMIQMFV DHPALKSYDL SSLKNIIYGA SPISEAVLAR ASAALPHVQF TQAYGMTELS PIATLLHWKE HIGDGKAKGR QRAAGRATLG CEVRIVDADD QPVPYGTVGE ICVRGDNVMM GYWERPEETA RALAGGWMHT GDGGYMDEHG FVYVVDRVKD MIISGGENVY SVEVENAVAQ HPAVAQCAVI GIPHEAWGEQ VHAVVVTKAG ASVTADELIA HCKALIAGYK CPRSVDITET PLPLSGAGKI LKRELRQPYW ENRERRVS
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