| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4078 |
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| Symbol | |
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| ID | 3911885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4649272 |
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| End bp | 4650456 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885982 |
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| Product | lipid-transfer protein |
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| Protein accession | YP_487682 |
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| Protein GI | 86751186 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.254094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAT CCGTCTACGT CGCCGGTGTC GGCATGATTC CTTTCGTCAA GCCGGGCGCC
AACGAGCCCT ATCACCTGAT GGGCGCCGAA GCGGCGCGGC GCGCGCTCAG CGACGCGGGT
GTCGGCTACG ACGCCATCCA GCAGGCCTTC GTCGGCTACG TTTACGGCGA CTCCACCTGC
GGGCAGCGCG CGCTGTATCA GGTCGGCATG ACCGGCGTGC CGATCGTCAA CGTCAACAAC
AACTGCTCGA CCGGCTCGAC CGCGCTGTTT CTGGCGCGGC AGGCGATCGC CTCGGGTGCG
GCCGATTGCG TGCTGGCGCT CGGCTTCGAG CAGATGAAGC CCGGTGCGCT CGGCTCGGTG
TTCGTCGATC GCCCCAGCGC GTTCGAGGAT TTCGATGCCG CCGCCGACAA GTTGATCGAT
GCGCCCGGCA TTCCGCTGGC GCTGCGCTAT TTCGGCGGCG CCGGCCTCAG CCACATGCAG
AAGCACGGCA CGCCGCTGTC GTCCTTCGCC AAGGTCCGCG CCAAAGCGAG CCGCCACGCC
GCGAAAAATC CGCTGGCGTT GTTCCGCAAG GAAGTCACCG CGGAGGACGT GCTGAACGAC
CAGGTGATCT GGCCCGGCGT GATGACGCGG CTGATGGCGT GCCCGCCGAC CTGCGGCGGT
GCCGCGGCTG TGCTGGTGTC GGAAGCCTTC GCCAAGAAGC ACGGCCTCAA CATCAACGTC
CGCATCGCTG CGCAAGCAAT GACAACCGAC ACGCCCTCGA CATTCGACGC GGGCGACATG
ATGCGGGTGG TCGGCTACGA CATGGCGCGT GCCGCGGCCG ACAAGGTCTA CGAGCAGGCC
GGCGTGGGCC CGAAGGACAT CGACGTCGTC GAGCTGCACG ACTGCTTCGC CCACAACGAG
TTGATCACCT ACGAGGCGCT CGGCCTGTGC CCCGAAGGCG GCGCCGAGAA GTTCATCGAC
GACGGCGACA ACACCTATGG CGGCCAATTC GTCACCAATC CGTCCGGCGG GTTGCTGTCG
AAAGGCCATC CGCTCGGCGC CACCGGGCTC GCGCAGTGCT ACGAACTGAC CCGGCAGTTG
CGCGGCTCCG CGGAGGCGAC GCAGGTGGAC GGCGCGAAGC GCGCGCTGCA GCACAATCTC
GGCCTCGGCG GGGCTTGCGT CGTCACCCTT TACGAACGCG CCTGA
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| Protein sequence | MASSVYVAGV GMIPFVKPGA NEPYHLMGAE AARRALSDAG VGYDAIQQAF VGYVYGDSTC
GQRALYQVGM TGVPIVNVNN NCSTGSTALF LARQAIASGA ADCVLALGFE QMKPGALGSV
FVDRPSAFED FDAAADKLID APGIPLALRY FGGAGLSHMQ KHGTPLSSFA KVRAKASRHA
AKNPLALFRK EVTAEDVLND QVIWPGVMTR LMACPPTCGG AAAVLVSEAF AKKHGLNINV
RIAAQAMTTD TPSTFDAGDM MRVVGYDMAR AAADKVYEQA GVGPKDIDVV ELHDCFAHNE
LITYEALGLC PEGGAEKFID DGDNTYGGQF VTNPSGGLLS KGHPLGATGL AQCYELTRQL
RGSAEATQVD GAKRALQHNL GLGGACVVTL YERA
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