| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4077 |
|---|
| Symbol | |
|---|
| ID | 3911884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4648815 |
|---|
| End bp | 4649261 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637885981 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_487681 |
|---|
| Protein GI | 86751185 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.372535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATC AATCCGCGGT CGGTCGCCGG TTCACGCCGG TGACGGCCCA AGTCGAGCCG
GGCCGTCTGC GCTATTTTTT CGAGACGCTC GGCGAGTCCA ATCCCGTGTA TCGCGACGCC
GCGGCGGCCA CAGCCGCCTG CTACAGGGGG ATTCCGATCC CGCCGACCTA TCTGTTCTGT
CTGGAGATGC TCGACAACGA AAAGTCGTTC GAATTTCTCA CCGCGCTCGA TATCGATCTC
GGTCGCGTGC TGCACGGCGA GCAGAGCTTC GTTTATCACG CTCCGGTCGT CGTCGGTGAC
ACGCTGACCT TCAGCCCGCG CGTCGCCAGC GTTACGGACA AGAAGGGCGG TGCGATGACG
CTGATCGTGG TCGAGACCGC GGTGACCAAT CAGGACGGCG TCCATGTGGC CGATACGGCC
CGGACGATCG TCGTCCGCAA CGGGTGA
|
|---|
| Protein sequence | MVDQSAVGRR FTPVTAQVEP GRLRYFFETL GESNPVYRDA AAATAACYRG IPIPPTYLFC
LEMLDNEKSF EFLTALDIDL GRVLHGEQSF VYHAPVVVGD TLTFSPRVAS VTDKKGGAMT
LIVVETAVTN QDGVHVADTA RTIVVRNG
|
|---|
| |