| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4072 |
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| Symbol | |
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| ID | 3911879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4644034 |
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| End bp | 4645560 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885976 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_487676 |
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| Protein GI | 86751180 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.979079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG CCTATTTCGA CTGGATCACC CATCACGCCG AAGTTCGTCC CGACCGGATC
GCGTTGATCG ATCTCGCCAC GCAACGCCGG CTGACCTATC GCGCGCTCGA TGATCGGATC
GATCGCCTGG CGTCGCACCT CGCGTCGCTC GGCGTCGGCC GTGGCGATCG CGTCGCGGTG
CTGGCCGCCA ACACCACCGA CACGCTGGAG GTGCAATTCG CCTGCTTCCG GCTCGGCGCG
ATCTTCGTGC CGCTGAATGT GCGGCTGACC GTGCACGAAT TGTCGTTCAT CGTCGGCGAC
GCCGCACCGC TTGTGCTGGC GCATGATTCC GATTTCGCCG CGATGGCCGG CGATCTTCAG
AGCAAATGCG GCATCGCGCA TCTCCTGCAG TTCGGCGCGC CCTACGAGGC CGCGCTGTCG
GCTGCGCCGC GGCTCGCCCG CGCCGAGGCG GTGACGCTCG ATGACGTCTC GACCATCATG
TACACCTCGG GGACGACGGG AAAACCGAAG GGCGCGATGA TCACGCACCT GATGACCTTC
ATCAACGCGG TCAATCTCGG CATCCCGGCC TTCATCACCC AGCGCACCGT GTTTCTCTGC
GTGATGCCGC TGTTCCACAC CGGCGGGCTG AATTGCTACA CCAACCCGGT GCTGCACGCC
GGCGGCACGG TGATCCTGAT GCGCGCCTTC GATCCCGGCG AAACGCTGCG GCTGATCGGC
GACGCTGGCA TCGGCCTGAC GCATTTCTTC GGCGTGCCGT CGATCTATCA GTTCATGTGC
CAGCATCCCG CCTTCGCAGA CACCGATCTG TCGCGGCTGC AGATGGCGGG CGTCGGCGGG
GCGCCGATGC CGGTGCCGCT GCTCAGGATC TGGCAGGAGC GCGGCTGCAC CCTGGTGCAA
GGCTACGGCA TGACGGAAAC CAGCCCCGCG GTGATGATGC TGGATTCCGA CGACGCCGCG
CGCAAGGCGG GCTCGGCCGG CAAGCCGGTG CTGCACGCCG ATCTGAAGAT CGTCGGCCCC
GATGGCGAGC CGGTCGCGCC CGGCGAGATG GGCGAGCTCT GGGTGAAAGG CCCCAACATC
ACCCCCGGCT ACTGGAACCG GCCGGAGGCC AACCGCACCT CGTTCACCGA CGGCTGGCTG
CACACCGGCG ATGCCGCACG CGTCGACGGC GAAGGCTTCT ACTACATCGT CGACCGCACC
AAGGACATGT ACATCTCCGG CGGCGAGAAC GTCTATCCGG CCGAAGTCGA GGACGTGCTG
TATCAGCTGC CGGAGATCGC CGAGGCCGCC GTGATCGGCG CACCCGATCC GCAATGGGGC
GAGACCGGCG TGGCGATCAT CGCGGTCAAG ACCGGCCACG ACCTTCCGGA AGCGAAGCTG
CACACCCATT GCCGCGAGCG ACTGGCCCGG TTCAAATGCC CGCAGCGGGT GGTCTTCGTC
GAGGCGCTGC CACGCAACGC CACCGGCAAG GTGCACAAGC CGACCCTGCG CGAGCGCTTC
CTGGTGCGGG AGACGATGGA CGCGTAA
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| Protein sequence | MSFAYFDWIT HHAEVRPDRI ALIDLATQRR LTYRALDDRI DRLASHLASL GVGRGDRVAV
LAANTTDTLE VQFACFRLGA IFVPLNVRLT VHELSFIVGD AAPLVLAHDS DFAAMAGDLQ
SKCGIAHLLQ FGAPYEAALS AAPRLARAEA VTLDDVSTIM YTSGTTGKPK GAMITHLMTF
INAVNLGIPA FITQRTVFLC VMPLFHTGGL NCYTNPVLHA GGTVILMRAF DPGETLRLIG
DAGIGLTHFF GVPSIYQFMC QHPAFADTDL SRLQMAGVGG APMPVPLLRI WQERGCTLVQ
GYGMTETSPA VMMLDSDDAA RKAGSAGKPV LHADLKIVGP DGEPVAPGEM GELWVKGPNI
TPGYWNRPEA NRTSFTDGWL HTGDAARVDG EGFYYIVDRT KDMYISGGEN VYPAEVEDVL
YQLPEIAEAA VIGAPDPQWG ETGVAIIAVK TGHDLPEAKL HTHCRERLAR FKCPQRVVFV
EALPRNATGK VHKPTLRERF LVRETMDA
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