Gene RPB_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4067 
Symbol 
ID3911874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4640748 
End bp4641959 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID637885971 
Productcobalamin synthesis protein, P47K 
Protein accessionYP_487671 
Protein GI86751175 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAT CCCGACTTCC GGTCACGGTG CTGTCCGGCT TTCTCGGCGC CGGAAAGACC 
ACCTTGCTCA ACCGCATGCT GACCAATCGC GAGGGCCGGC GTATCGCGGT GATCGTCAAT
GACATGAGCG AGGTGAACAT CGACGCCGAA CTGGTGCGAC AGGACGGCGG GCTGACGCGA
TCGGAAGAAT CGCTGGTGGA AATGACCAAT GGCTGCATCT GCTGCACGTT GCGCGAAGAT
CTCCTGATCG AGGTCCGCAA GCTCGCCGAA AGCGGCCGGT TCGACGCCCT GGTGATCGAA
TCGACGGGCA TCGCCGAGCC GCTGCCGATC GCCACCACCT TCGAGTTCCG TGACGAAGAA
GGCGCCAGCC TGTCCGACAT CGCCCGGCTC GACACCATGG TGACCGTCGT TGACGCCGCG
AGCCTGCTCT CCAACTATTC GAGCCAGGAG TTCCTGCGCG ACCGTGGCGA GGTTGCCGGC
GAGCAGGACG ATCGCACTTT GGTCGACCTG CTGGTCGAAC AGATCGAGTT CGCCGACGTC
ATCGTGCTCA ACAAGGTCTC GGCCACCTCG CCGGCCCGAC TCGAAGCGGC GCGGGCGATC
GTCCGCTCGC TGAATTCGGA CGCCCGGATC ATCGAGACGG ATTTCGGCGA CGTTCCGCTG
CAGTCGGTGC TGCACACCGG GCTGTTCGAT TTCGAGCGGG CGCATCAGCA CCCGCTGTGG
TTCAAAGAGT TGAACGGCTT CAAGGATCAC GTACCCGAAA CCGACGAATA CGGCATCAGC
TCGTTCGTGT ATCGCGCCCG GAGACCATTT CATCCGGCAC GGTTTCAGGG GTTCTGCAAC
TGCAGCTGGC CGGGCGTGAT CCGCGCCAAG GGGTTCTTCT GGCTCGCAAC CCGGCCGCAT
TACGTGGGCG AATTGGCCCA GGCCGGCGCC GTGGTGCGCA CCTCGAAGCG TGGCCTGTGG
TGGTCGGCGG TGCCCAAGGC GCGATGGCCC GATCAGGAGT CCTGGCGCGA AGCGATGCAG
CCCTATTTCG ACCCGGTGTG GGGCGACCGG CGCCAGGAAA TCGTCTTCAT CGGCACCGGC
GAGATGGACG AGACCGCCTT GCGCCGGCAG CTCGACGCCT GTCTGGTCGG CGACCCTGCA
CAGTTCACGC CGGACGCCTG GCGAGCACTG CCGGATCCGT TCCCGAATTG GGCTCCGGCC
GAGGTCTCAT AG
 
Protein sequence
MLESRLPVTV LSGFLGAGKT TLLNRMLTNR EGRRIAVIVN DMSEVNIDAE LVRQDGGLTR 
SEESLVEMTN GCICCTLRED LLIEVRKLAE SGRFDALVIE STGIAEPLPI ATTFEFRDEE
GASLSDIARL DTMVTVVDAA SLLSNYSSQE FLRDRGEVAG EQDDRTLVDL LVEQIEFADV
IVLNKVSATS PARLEAARAI VRSLNSDARI IETDFGDVPL QSVLHTGLFD FERAHQHPLW
FKELNGFKDH VPETDEYGIS SFVYRARRPF HPARFQGFCN CSWPGVIRAK GFFWLATRPH
YVGELAQAGA VVRTSKRGLW WSAVPKARWP DQESWREAMQ PYFDPVWGDR RQEIVFIGTG
EMDETALRRQ LDACLVGDPA QFTPDAWRAL PDPFPNWAPA EVS