| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4066 |
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| Symbol | |
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| ID | 3911873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4638581 |
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| End bp | 4640440 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885970 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_487670 |
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| Protein GI | 86751174 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.405184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAT ATCGATCCCG AACGACCACT CACGGCCGCA ACATGGCCGG CGCGCGCGGC
CTCTGGCGCG CCACCGGGAT GAAGGATTCC GACTTCGGCA AGCCGATCAT CGCCGTCGTC
AACTCCTTCA CGCAGTTCGT GCCGGGGCAC GTGCATCTGA AGGATCTCGG CCAGCTCGTC
GCCCGGGAGA TCGAGGCCGC CGGCGGCGTC GCCAAGGAAT TCAACACCAT CGCGGTCGAC
GACGGCATCG CGATGGGCCA TGACGGCATG CTGTACAGCC TGCCGTCGCG CGAACTGATC
GCCGACAGCG TCGAATACAT GGTCAACGCG CACTGCGCCG ACGCGATGGT CTGCATCTCG
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCCGCGA TGCGGCTCAA CATCCCAGCG
GTGTTCGTCT CCGGCGGGCC GATGGAAGCG GGCAAAGTGG TGTTGAAGGG CAAGACCCAC
GCCGTCGACC TGATCGACGC GATGGTCGCG GCCGCCGACA GCAGCATGAG CGACGAAGAC
GTGCAGACGA TGGAGCGCTC GGCGTGCCCG ACCTGCGGCT CCTGCTCCGG CATGTTCACC
GCCAATTCGA TGAACTGTCT CGCCGAGGCG CTGGGTCTGG CGCTGCCCGG CAACGGCTCG
GTGCTCGCCA CCCATGCCGA TCGCAAGCGG CTGTTCGTCG AGGCCGGTCA CACCATCGTC
GATCTGGCGC GGCGCTACTA CGAAGGCGAC GACGAATCCG TGCTGCCGCG CAAGGTCGCG
AGCTTCGAGG CGTTCGAGAA CGCGATGACG CTCGACATCG CGATGGGCGG CTCGACCAAC
ACGGTGCTGC ATCTGCTCGC CGCGGCGCGC GAGGCCGAAC TCGACTTCTC GATGAAGGAC
ATCGACCGGC TGTCGCGCAA GGTGCCGTGC CTGAGCAAGA TCGCCCCGTC GGTGTCCGAC
GTCCACATGG AGGACGTGCA TCGCGCCGGC GGCATCATGG CGATCCTCGG CGAGCTCGAT
CGCGCCGGAC TGATCCACAA CTCATGCCCG ACTGTGCATT CGGAGACGCT CGGTGCCGCG
CTGGCGCGCT GGGACATCCG CCAGAGCAAC AGCGAAGCGG TCCGCACCTT CTACCGCGCC
GCGCCGGGCG GCGTGCCGAC CCAGGTTGCG TTCAGCCAGG ACCGCCGCTA CGACGAGCTC
GACCTCGACC GGCAGAAGGG CGTGATCCGC GACGCCGAGC ACGCCTTCAG CAAGGACGGC
GGCCTCGCGG TGCTGTACGG CAATATTGCG CTCGACGGCT GCATCGTGAA GACCGCCGGC
GTCGACGCCT CGATCCTGAC CTTCTCCGGC CCGGCGAAAG TGTTCGAGAG CCAGGACGAC
GCGGTGTCGG CGATCCTCGG CAACAAGATC GTCGCTGGCG ACGTCATCGT GATCCGCTAC
GAAGGGCCAC GTGGCGGGCC GGGCATGCAG GAGATGCTGT ATCCGACCAG CTATCTGAAG
TCGAAGGGCC TCGGCAAAGC CTGCGCGCTG ATCACCGACG GCCGCTTCTC CGGCGGCACC
TCGGGCCTGT CGATCGGTCA CGTCTCGCCC GAGGCTGCGG AAGGCGGCCT GATCGGACTG
GTGCGGAACG GCGACCGGAT TTCGATCGAC ATTCCCAATC GCGGCATCAC CCTTGACGTC
GCCGCTGACG AGCTGTCGCG GCGCGCCGAG GAGGAAGAGG CGAAGGGCGA CAAGGCCTGG
CAGCCGAAAG ACCGCAAGCG CAAGGTCTCG GCCGCGCTGC AGGCCTATGC CATGCTGACC
ACCAGCGCTG CGAACGGCGC GGTGCGCGAC GTCAACCGCA GGCTCGGCAA AGGAAAGTAG
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| Protein sequence | MPAYRSRTTT HGRNMAGARG LWRATGMKDS DFGKPIIAVV NSFTQFVPGH VHLKDLGQLV
AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPA VFVSGGPMEA GKVVLKGKTH AVDLIDAMVA AADSSMSDED
VQTMERSACP TCGSCSGMFT ANSMNCLAEA LGLALPGNGS VLATHADRKR LFVEAGHTIV
DLARRYYEGD DESVLPRKVA SFEAFENAMT LDIAMGGSTN TVLHLLAAAR EAELDFSMKD
IDRLSRKVPC LSKIAPSVSD VHMEDVHRAG GIMAILGELD RAGLIHNSCP TVHSETLGAA
LARWDIRQSN SEAVRTFYRA APGGVPTQVA FSQDRRYDEL DLDRQKGVIR DAEHAFSKDG
GLAVLYGNIA LDGCIVKTAG VDASILTFSG PAKVFESQDD AVSAILGNKI VAGDVIVIRY
EGPRGGPGMQ EMLYPTSYLK SKGLGKACAL ITDGRFSGGT SGLSIGHVSP EAAEGGLIGL
VRNGDRISID IPNRGITLDV AADELSRRAE EEEAKGDKAW QPKDRKRKVS AALQAYAMLT
TSAANGAVRD VNRRLGKGK
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