| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4054 |
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| Symbol | |
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| ID | 3911861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4624766 |
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| End bp | 4626169 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885958 |
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| Product | amidase |
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| Protein accession | YP_487658 |
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| Protein GI | 86751162 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.200253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCG AAACATCCTC CGGCTGGATG ACCGCCGCCG AGATCGCGGC GGCCGTCGCC
AACCGGACGA TGACCGCCCT CGACGCCACC GAAGCGGCGC TGGCGCGGAT CGCGCAGCGC
GACGCGACCC TGAATGCCTT CACCGACATC GTCGCCGAGC GCGCCCGCAA TCGCGCCCGC
GCGATCGATG CAGCGATCGC GCGCGGCGAA CAGGTCGGCC CGCTCGCCGG CGTGCCGTTC
GCGGTGAAGA ACCTGTTCAA TGTCGCGGGC CTGACGACCC GCGCCGGCTC CAAGATCAAT
CGCGACCTTG CCCCCGCGAA ACGCGATGCC ACGCTGATCG AGCGGCTGGA AGCCGCCGGC
GCGGTGCTGA TCGGCGCGCT CAACATGGGC GAATACGCCT ACGACTTCAC CGGCGAGAAT
TTTCACGACG GCCCGTCGCG CAATCCGCAC GACCCGACGC GGATGACCGG CGGCTCGTCC
GGCGGTTCGG GTGCCGCGGT CGGCGGCGGC GAGGTGCCGC TGGCGCTCGG CTCGGATACC
AATGGCTCGA TCCGGGTGCC GTCGTCGTTT TGCGGCATCT TCGGGCTGAA GCCGACCTAT
GGCCGGCTGC CGCGCTCGCG CTCGTTTCCG TTCGTCGCGA GCTTCGATCA CCTCGGCCCG
TTCGCGCGCA ACGTCGCAGA TCTCGCGCTC GCCTATGACG TGATGCAGGG GCCGGATTCC
GACGACGCCG CCTGCTCGAC GCGTTCGATC GAGCCGGTTC ACGCCGCGCT GGCGCAAGGC
CTCGACGGCC TGCGCATCGC GCGGGCCGGT GGGTACTTCG CGGCCAATCT GTTTCCCGAA
GCCCGTGAAG CCGTCGATCG CGTGGCGAAG GCGCTCAGTA TCACCATCAC CGTGGAACTG
CCCGAAGCCG CGCGCGCCCG CGCCGCGGCC TTCGTCATCA CCACTGTCGA GGGCGCGTCG
CTGCATCTCG ATCGTCTGCG CCAGCGGCCG AATGATTTCG ACCCCGCGGT GCGCGACCGG
CTGATTGCAG GGGCGATGAT CCCGGCGCCG CTGGTCGACC GCGCGCAGAA ATTTCGCCGC
TGGTATCGCG CGCGCGTGCT CGAGTTGTTC AGGGACGTGG ATGTCATCAT CGCGCCGGCG
ACCCCCTGCG TCGCGCCGAA GCTCGGGCAG CAGAGCTTCA TGCTCGACGG CGTGGAGCTG
CCGGTGCGCG CCAATATCGG CATCCACACC CAGCCGATCT CGTTCATCGG CCTCCCGGTC
GTGGCCGTGC CGATCCCGCT CGAGCCGATG CCGATCGGCA TCCAGATCAT CGCCGCGCCG
TGGCGCGAGG ACCTCGCGCT GCGCGTCGCG CATGCGCTCG AAACAGCCGG CGTCGCCTGC
GCGCCGCGCC CGCAAACCTT TTGA
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| Protein sequence | MKSETSSGWM TAAEIAAAVA NRTMTALDAT EAALARIAQR DATLNAFTDI VAERARNRAR
AIDAAIARGE QVGPLAGVPF AVKNLFNVAG LTTRAGSKIN RDLAPAKRDA TLIERLEAAG
AVLIGALNMG EYAYDFTGEN FHDGPSRNPH DPTRMTGGSS GGSGAAVGGG EVPLALGSDT
NGSIRVPSSF CGIFGLKPTY GRLPRSRSFP FVASFDHLGP FARNVADLAL AYDVMQGPDS
DDAACSTRSI EPVHAALAQG LDGLRIARAG GYFAANLFPE AREAVDRVAK ALSITITVEL
PEAARARAAA FVITTVEGAS LHLDRLRQRP NDFDPAVRDR LIAGAMIPAP LVDRAQKFRR
WYRARVLELF RDVDVIIAPA TPCVAPKLGQ QSFMLDGVEL PVRANIGIHT QPISFIGLPV
VAVPIPLEPM PIGIQIIAAP WREDLALRVA HALETAGVAC APRPQTF
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